Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TRBV12-2-201ENST00000489763 344 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 SETP14-201ENST00000497538 873 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AC111193.1-201ENST00000504097 155 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AC025768.1-201ENST00000510057 267 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 NDUFB4P9-201ENST00000511646 388 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 RNA5SP309-201ENST00000516670 106 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 OR8K2P-201ENST00000524645 927 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 PTP4A1P6-201ENST00000531034 478 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AC069240.1-201ENST00000548774 375 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AC107016.1-201ENST00000550463 337 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AL392112.1-201ENST00000605115 829 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AC135178.6-201ENST00000605314 398 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AC012531.5-201ENST00000611375 151 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AL442067.2-201ENST00000614033 363 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 MIR218-2-201ENST00000385006 110 ntBASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 AC017079.2-201ENST00000416102 485 ntBASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 TPTE2P3-201ENST00000441562 1189 ntBASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 RPL26P28-201ENST00000451325 435 ntBASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 MTND2P30-201ENST00000456663 382 ntBASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 OR5M7P-201ENST00000526140 972 ntBASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 MTND4LP24-201ENST00000572277 291 ntBASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 SUMO2P14-201ENST00000604488 293 ntBASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 AC004775.1-201ENST00000607389 753 ntBASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHROOM1Q2M3G4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AL049737.1-201ENST00000413920 1403 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AC083899.2-201ENST00000423285 1376 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AC090337.1-201ENST00000579651 2074 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 RNU1-108P-201ENST00000362556 161 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 RPL17P50-201ENST00000396131 546 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AL391219.1-201ENST00000422570 483 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 MORF4L1P7-201ENST00000426038 703 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AC097713.2-201ENST00000430199 356 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 ATP5JP1-201ENST00000431631 322 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 BX510359.1-201ENST00000456973 237 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AP000873.1-201ENST00000463987 400 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AC025518.1-201ENST00000479856 347 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 RNA5SP164-201ENST00000516533 110 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AC023161.2-201ENST00000551218 780 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AC115085.1-201ENST00000588924 229 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 PCNAP1-202ENST00000595299 752 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AC010591.1-201ENST00000603941 649 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 ELOCP35-201ENST00000604289 336 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AC092354.2-201ENST00000607786 514 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AC112503.1-201ENST00000608436 391 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AC128687.2-201ENST00000609657 566 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 MIR1264-201ENST00000616374 69 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms