Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SSBP1Q04837 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.6□□□□□ -1.99
SSBP1Q04837 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.59□□□□□ -1.99
SSBP1Q04837 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.59□□□□□ -1.99
SSBP1Q04837 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SSBP1Q04837 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SSBP1Q04837 GABRG2-229ENST00000641017 3628 ntBASIC2.59□□□□□ -1.99
SSBP1Q04837 AC093010.3-201ENST00000570269 15214 ntBASIC2.59□□□□□ -1.99
SSBP1Q04837 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SSBP1Q04837 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SSBP1Q04837 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.59□□□□□ -1.99
SSBP1Q04837 MTCO1P35-201ENST00000515270 228 ntBASIC2.59□□□□□ -1.99
SSBP1Q04837 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC2.59□□□□□ -1.99
SSBP1Q04837 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.59□□□□□ -1.99
SSBP1Q04837 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.59□□□□□ -1.99
SSBP1Q04837 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.59□□□□□ -1.99
SSBP1Q04837 AC022916.3-201ENST00000592961 742 ntBASIC2.59□□□□□ -1.99
SSBP1Q04837 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.59□□□□□ -1.99
SSBP1Q04837 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.59□□□□□ -1.99
SSBP1Q04837 AC116651.1-201ENST00000609724 556 ntBASIC2.59□□□□□ -1.99
SSBP1Q04837 AC019176.2-201ENST00000611579 315 ntBASIC2.59□□□□□ -1.99
SSBP1Q04837 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.59□□□□□ -1.99
SSBP1Q04837 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.59□□□□□ -2
SSBP1Q04837 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
SSBP1Q04837 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.59□□□□□ -2
SSBP1Q04837 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SSBP1Q04837 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.59□□□□□ -2
SSBP1Q04837 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.58□□□□□ -2
SSBP1Q04837 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC2.58□□□□□ -2
SSBP1Q04837 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.58□□□□□ -2
SSBP1Q04837 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.58□□□□□ -2
SSBP1Q04837 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.58□□□□□ -2
SSBP1Q04837 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SSBP1Q04837 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.58□□□□□ -2
SSBP1Q04837 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SSBP1Q04837 RPL21P2-201ENST00000440049 481 ntBASIC2.58□□□□□ -2
SSBP1Q04837 NOTCH2P1-201ENST00000443481 624 ntBASIC2.58□□□□□ -2
SSBP1Q04837 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC2.58□□□□□ -2
SSBP1Q04837 RPL21P41-201ENST00000459863 264 ntBASIC2.58□□□□□ -2
SSBP1Q04837 AC089999.1-201ENST00000460336 374 ntBASIC2.58□□□□□ -2
SSBP1Q04837 PPIAP21-201ENST00000464473 501 ntBASIC2.58□□□□□ -2
SSBP1Q04837 RPS27AP9-201ENST00000477681 438 ntBASIC2.58□□□□□ -2
SSBP1Q04837 AC037198.2-201ENST00000478845 733 ntBASIC2.58□□□□□ -2
SSBP1Q04837 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.58□□□□□ -2
SSBP1Q04837 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.58□□□□□ -2
SSBP1Q04837 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.58□□□□□ -2
SSBP1Q04837 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC2.58□□□□□ -2
SSBP1Q04837 AP001207.1-201ENST00000524051 481 ntBASIC2.58□□□□□ -2
SSBP1Q04837 CR383656.6-201ENST00000550518 394 ntBASIC2.58□□□□□ -2
SSBP1Q04837 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.58□□□□□ -2
SSBP1Q04837 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.58□□□□□ -2
SSBP1Q04837 AC090115.4-201ENST00000609970 188 ntBASIC2.58□□□□□ -2
SSBP1Q04837 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC2.58□□□□□ -2
SSBP1Q04837 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC2.58□□□□□ -2
SSBP1Q04837 AC010435.1-201ENST00000623353 1177 ntBASIC2.58□□□□□ -2
SSBP1Q04837 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC2.58□□□□□ -2
SSBP1Q04837 MIR6733-201ENST00000635723 61 ntBASIC2.58□□□□□ -2
SSBP1Q04837 MIR622-201ENST00000638396 96 ntBASIC2.58□□□□□ -2
SSBP1Q04837 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SSBP1Q04837 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SSBP1Q04837 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.58□□□□□ -2
SSBP1Q04837 AL592437.2-201ENST00000421655 2434 ntBASIC2.58□□□□□ -2
SSBP1Q04837 AL079305.1-201ENST00000623159 3008 ntBASIC2.58□□□□□ -2
SSBP1Q04837 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.58□□□□□ -2
SSBP1Q04837 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.57□□□□□ -2
SSBP1Q04837 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.57□□□□□ -2
SSBP1Q04837 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SSBP1Q04837 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.57□□□□□ -2
SSBP1Q04837 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SSBP1Q04837 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
SSBP1Q04837 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.57□□□□□ -2
SSBP1Q04837 U8.9-201ENST00000365667 134 ntBASIC2.57□□□□□ -2
SSBP1Q04837 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SSBP1Q04837 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.57□□□□□ -2
SSBP1Q04837 SNORD15B-201ENST00000384714 146 ntBASIC2.57□□□□□ -2
SSBP1Q04837 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.57□□□□□ -2
SSBP1Q04837 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.57□□□□□ -2
SSBP1Q04837 RPS27AP12-201ENST00000429552 465 ntBASIC2.57□□□□□ -2
SSBP1Q04837 AC073063.1-201ENST00000434352 607 ntBASIC2.57□□□□□ -2
SSBP1Q04837 RPS29P7-201ENST00000439662 171 ntBASIC2.57□□□□□ -2
SSBP1Q04837 ELOCP10-201ENST00000440624 327 ntBASIC2.57□□□□□ -2
SSBP1Q04837 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.57□□□□□ -2
SSBP1Q04837 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.57□□□□□ -2
SSBP1Q04837 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.57□□□□□ -2
SSBP1Q04837 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.57□□□□□ -2
SSBP1Q04837 AC007688.1-201ENST00000475592 759 ntBASIC2.57□□□□□ -2
SSBP1Q04837 AC117394.1-201ENST00000477323 567 ntBASIC2.57□□□□□ -2
SSBP1Q04837 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.57□□□□□ -2
SSBP1Q04837 NPM1P41-201ENST00000512920 831 ntBASIC2.57□□□□□ -2
SSBP1Q04837 RNU6-826P-201ENST00000516827 104 ntBASIC2.57□□□□□ -2
SSBP1Q04837 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SSBP1Q04837 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.57□□□□□ -2
SSBP1Q04837 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.57□□□□□ -2
SSBP1Q04837 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.57□□□□□ -2
SSBP1Q04837 ZNF415P1-201ENST00000582279 1166 ntBASIC2.57□□□□□ -2
SSBP1Q04837 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
SSBP1Q04837 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.57□□□□□ -2
SSBP1Q04837 AC010680.3-201ENST00000604215 520 ntBASIC2.57□□□□□ -2
SSBP1Q04837 ELOCP34-201ENST00000604436 327 ntBASIC2.57□□□□□ -2
SSBP1Q04837 AL162713.1-201ENST00000604480 262 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms