Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC006206.1-201ENST00000544842 3387 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX6-1P78426 MAPK10-304ENST00000641341 3984 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NKX6-1P78426 AC021242.1-201ENST00000507315 2035 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NKX6-1P78426 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX6-1P78426 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NKX6-1P78426 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
NKX6-1P78426 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 AC093535.2-201ENST00000624769 2326 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 KPNA2P2-201ENST00000419546 1489 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 AC092447.7-201ENST00000422212 1621 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
NKX6-1P78426 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 RNU6-769P-201ENST00000384407 104 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 SNORA40.3-201ENST00000390964 122 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 RNA5SP339-201ENST00000390987 122 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 AL109941.1-201ENST00000401925 229 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 AL049697.2-201ENST00000403708 294 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 AF274854.1-201ENST00000413236 615 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.69□□□□□ -1.66
NKX6-1P78426 RPL31P45-201ENST00000419532 356 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.69□□□□□ -1.66
NKX6-1P78426 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX6-1P78426 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX6-1P78426 OR51AB1P-201ENST00000429046 620 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.69□□□□□ -1.66
NKX6-1P78426 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX6-1P78426 GDI2P2-201ENST00000445131 608 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX6-1P78426 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX6-1P78426 AL035090.1-201ENST00000454835 332 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.69□□□□□ -1.66
NKX6-1P78426 SNORD42A-201ENST00000459584 64 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 AP001025.2-201ENST00000490908 477 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 RPL7P24-201ENST00000493052 752 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX6-1P78426 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX6-1P78426 DUXAP2-201ENST00000519198 589 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX6-1P78426 HMGB1P40-201ENST00000525121 540 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 OR5BC1P-201ENST00000529327 739 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 AL139174.1-201ENST00000531489 886 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX6-1P78426 GSTP1P1-201ENST00000548078 319 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 PCNPP1-201ENST00000552501 511 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 OR11J2P-201ENST00000555298 907 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX6-1P78426 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.69□□□□□ -1.66
NKX6-1P78426 MIR5697-201ENST00000578045 78 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 AP005403.1-201ENST00000579720 229 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 MIR3934-201ENST00000579806 107 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 AC011840.5-201ENST00000582125 771 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX6-1P78426 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.69□□□□□ -1.66
NKX6-1P78426 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 AL353662.3-201ENST00000625131 237 ntBASIC4.69□□□□□ -1.66
NKX6-1P78426 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NKX6-1P78426 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.69□□□□□ -1.66
NKX6-1P78426 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NKX6-1P78426 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.69□□□□□ -1.66
NKX6-1P78426 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.69□□□□□ -1.66
NKX6-1P78426 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NKX6-1P78426 AL078621.3-201ENST00000623707 2042 ntBASIC4.68□□□□□ -1.66
NKX6-1P78426 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NKX6-1P78426 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NKX6-1P78426 AC104964.3-201ENST00000606115 2860 ntBASIC4.68□□□□□ -1.66
NKX6-1P78426 AC079097.1-201ENST00000512187 1399 ntBASIC4.68□□□□□ -1.66
NKX6-1P78426 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
NKX6-1P78426 AC104623.2-202ENST00000623477 4002 ntBASIC4.68□□□□□ -1.66
NKX6-1P78426 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NKX6-1P78426 AC008758.3-201ENST00000507003 1829 ntBASIC4.68□□□□□ -1.66
NKX6-1P78426 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.68□□□□□ -1.66
NKX6-1P78426 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NKX6-1P78426 RN7SKP224-201ENST00000364140 325 ntBASIC4.68□□□□□ -1.66
NKX6-1P78426 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.68□□□□□ -1.66
NKX6-1P78426 RNU6-533P-201ENST00000384144 107 ntBASIC4.68□□□□□ -1.66
NKX6-1P78426 RNU6-809P-201ENST00000384461 107 ntBASIC4.68□□□□□ -1.66
NKX6-1P78426 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NKX6-1P78426 DUTP5-201ENST00000406790 469 ntBASIC4.68□□□□□ -1.66
NKX6-1P78426 MIR1250-201ENST00000408098 113 ntBASIC4.68□□□□□ -1.66
NKX6-1P78426 U3.36-201ENST00000408418 213 ntBASIC4.68□□□□□ -1.66
NKX6-1P78426 AC016397.1-201ENST00000412463 242 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms