Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.44□□□□□ -1.7
RAE1P78406 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.44□□□□□ -1.7
RAE1P78406 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.44□□□□□ -1.7
RAE1P78406 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.44□□□□□ -1.7
RAE1P78406 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.44□□□□□ -1.7
RAE1P78406 MTND1P34-201ENST00000438556 671 ntBASIC4.44□□□□□ -1.7
RAE1P78406 PTMAP6-201ENST00000439110 327 ntBASIC4.44□□□□□ -1.7
RAE1P78406 BMI1P1-201ENST00000445879 941 ntBASIC4.44□□□□□ -1.7
RAE1P78406 VN1R10P-201ENST00000447106 875 ntBASIC4.44□□□□□ -1.7
RAE1P78406 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.44□□□□□ -1.7
RAE1P78406 RPL39P6-201ENST00000448289 150 ntBASIC4.44□□□□□ -1.7
RAE1P78406 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.44□□□□□ -1.7
RAE1P78406 AC092757.1-201ENST00000467293 467 ntBASIC4.44□□□□□ -1.7
RAE1P78406 OR52A4P-201ENST00000472867 958 ntBASIC4.44□□□□□ -1.7
RAE1P78406 AC010301.1-201ENST00000473936 355 ntBASIC4.44□□□□□ -1.7
RAE1P78406 AC074386.1-201ENST00000476560 767 ntBASIC4.44□□□□□ -1.7
RAE1P78406 RN7SL591P-201ENST00000496150 292 ntBASIC4.44□□□□□ -1.7
RAE1P78406 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.44□□□□□ -1.7
RAE1P78406 AC079140.3-201ENST00000511111 550 ntBASIC4.44□□□□□ -1.7
RAE1P78406 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.44□□□□□ -1.7
RAE1P78406 RFPL4AP5-201ENST00000514977 504 ntBASIC4.44□□□□□ -1.7
RAE1P78406 SCARNA21.2-201ENST00000516600 166 ntBASIC4.44□□□□□ -1.7
RAE1P78406 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.44□□□□□ -1.7
RAE1P78406 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RAE1P78406 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.44□□□□□ -1.7
RAE1P78406 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.44□□□□□ -1.7
RAE1P78406 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.44□□□□□ -1.7
RAE1P78406 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.44□□□□□ -1.7
RAE1P78406 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.44□□□□□ -1.7
RAE1P78406 GTF2IP22-201ENST00000554443 182 ntBASIC4.44□□□□□ -1.7
RAE1P78406 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.44□□□□□ -1.7
RAE1P78406 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.44□□□□□ -1.7
RAE1P78406 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.44□□□□□ -1.7
RAE1P78406 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.44□□□□□ -1.7
RAE1P78406 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.44□□□□□ -1.7
RAE1P78406 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.44□□□□□ -1.7
RAE1P78406 AC104785.1-201ENST00000603220 588 ntBASIC4.44□□□□□ -1.7
RAE1P78406 AC093765.1-201ENST00000603758 881 ntBASIC4.44□□□□□ -1.7
RAE1P78406 AC005191.1-201ENST00000603950 358 ntBASIC4.44□□□□□ -1.7
RAE1P78406 AL031320.1-201ENST00000604177 357 ntBASIC4.44□□□□□ -1.7
RAE1P78406 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.44□□□□□ -1.7
RAE1P78406 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.44□□□□□ -1.7
RAE1P78406 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.44□□□□□ -1.7
RAE1P78406 AC025048.6-202ENST00000627667 438 ntBASIC4.44□□□□□ -1.7
RAE1P78406 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RAE1P78406 MTCO1P23-201ENST00000415223 1526 ntBASIC4.44□□□□□ -1.7
RAE1P78406 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RAE1P78406 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RAE1P78406 AC135352.1-201ENST00000506173 1418 ntBASIC4.44□□□□□ -1.7
RAE1P78406 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.44□□□□□ -1.7
RAE1P78406 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.44□□□□□ -1.7
RAE1P78406 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.44□□□□□ -1.7
RAE1P78406 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
RAE1P78406 MTND5P29-201ENST00000458676 1807 ntBASIC4.44□□□□□ -1.7
RAE1P78406 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.44□□□□□ -1.7
RAE1P78406 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
RAE1P78406 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAE1P78406 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
RAE1P78406 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAE1P78406 PABPC1P9-201ENST00000426076 1612 ntBASIC4.43□□□□□ -1.7
RAE1P78406 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAE1P78406 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.43□□□□□ -1.7
RAE1P78406 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAE1P78406 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RAE1P78406 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.43□□□□□ -1.7
RAE1P78406 RNY3P10-201ENST00000384764 102 ntBASIC4.43□□□□□ -1.7
RAE1P78406 SNRPEP2-201ENST00000397592 279 ntBASIC4.43□□□□□ -1.7
RAE1P78406 RNU2-16P-201ENST00000410712 136 ntBASIC4.43□□□□□ -1.7
RAE1P78406 RN7SKP100-201ENST00000411258 284 ntBASIC4.43□□□□□ -1.7
RAE1P78406 RPS7P13-201ENST00000413955 498 ntBASIC4.43□□□□□ -1.7
RAE1P78406 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.43□□□□□ -1.7
RAE1P78406 RPS3AP9-201ENST00000417027 792 ntBASIC4.43□□□□□ -1.7
RAE1P78406 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.43□□□□□ -1.7
RAE1P78406 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RAE1P78406 ZYG11AP1-201ENST00000430329 837 ntBASIC4.43□□□□□ -1.7
RAE1P78406 RPL36P19-201ENST00000430744 301 ntBASIC4.43□□□□□ -1.7
RAE1P78406 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.43□□□□□ -1.7
RAE1P78406 AC005154.2-201ENST00000438110 379 ntBASIC4.43□□□□□ -1.7
RAE1P78406 RPS24P1-201ENST00000438550 371 ntBASIC4.43□□□□□ -1.7
RAE1P78406 AC092641.1-201ENST00000440229 772 ntBASIC4.43□□□□□ -1.7
RAE1P78406 AL589765.3-201ENST00000446084 462 ntBASIC4.43□□□□□ -1.7
RAE1P78406 ST13P20-201ENST00000447996 1065 ntBASIC4.43□□□□□ -1.7
RAE1P78406 OR1H1P-201ENST00000448731 937 ntBASIC4.43□□□□□ -1.7
RAE1P78406 EPS15P1-201ENST00000448836 336 ntBASIC4.43□□□□□ -1.7
RAE1P78406 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.43□□□□□ -1.7
RAE1P78406 RPL5P32-201ENST00000454085 879 ntBASIC4.43□□□□□ -1.7
RAE1P78406 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.43□□□□□ -1.7
RAE1P78406 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.43□□□□□ -1.7
RAE1P78406 RPL36AP41-201ENST00000493820 306 ntBASIC4.43□□□□□ -1.7
RAE1P78406 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RAE1P78406 AC114981.1-201ENST00000503897 678 ntBASIC4.43□□□□□ -1.7
RAE1P78406 RNA5SP446-201ENST00000515955 82 ntBASIC4.43□□□□□ -1.7
RAE1P78406 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.43□□□□□ -1.7
RAE1P78406 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.43□□□□□ -1.7
RAE1P78406 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.43□□□□□ -1.7
RAE1P78406 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.43□□□□□ -1.7
RAE1P78406 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RAE1P78406 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.43□□□□□ -1.7
RAE1P78406 AC007599.1-201ENST00000568688 1174 ntBASIC4.43□□□□□ -1.7
RAE1P78406 RN7SL652P-201ENST00000577769 300 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms