Protein–RNA interactions for Protein: P78317

RNF4, E3 ubiquitin-protein ligase RNF4, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4P78317 PANDAR-201ENST00000629595 1506 ntBASIC5.4□□□□□ -1.54
RNF4P78317 SAMMSON-213ENST00000641336 1521 ntBASIC5.4□□□□□ -1.54
RNF4P78317 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNF4P78317 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
RNF4P78317 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF4P78317 MIR375-201ENST00000362103 64 ntBASIC5.4□□□□□ -1.54
RNF4P78317 RNY1P12-201ENST00000364251 105 ntBASIC5.4□□□□□ -1.54
RNF4P78317 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RNF4P78317 RNA5SP284-201ENST00000384547 118 ntBASIC5.4□□□□□ -1.54
RNF4P78317 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF4P78317 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF4P78317 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF4P78317 AC092832.1-201ENST00000422934 400 ntBASIC5.4□□□□□ -1.54
RNF4P78317 RGS17P1-201ENST00000423358 553 ntBASIC5.4□□□□□ -1.54
RNF4P78317 AC018644.1-201ENST00000429934 551 ntBASIC5.4□□□□□ -1.54
RNF4P78317 AC005534.2-201ENST00000431047 433 ntBASIC5.4□□□□□ -1.54
RNF4P78317 RPS26P56-201ENST00000444468 240 ntBASIC5.4□□□□□ -1.54
RNF4P78317 CACYBPP2-201ENST00000453625 678 ntBASIC5.4□□□□□ -1.54
RNF4P78317 AC233279.1-201ENST00000455300 423 ntBASIC5.4□□□□□ -1.54
RNF4P78317 RNU7-63P-201ENST00000459054 62 ntBASIC5.4□□□□□ -1.54
RNF4P78317 AC063943.1-201ENST00000465434 453 ntBASIC5.4□□□□□ -1.54
RNF4P78317 PLGLA-201ENST00000465668 449 ntBASIC5.4□□□□□ -1.54
RNF4P78317 RPL7P19-201ENST00000469948 618 ntBASIC5.4□□□□□ -1.54
RNF4P78317 TRBV5-2-201ENST00000489095 273 ntBASIC5.4□□□□□ -1.54
RNF4P78317 RPS4XP14-201ENST00000493072 781 ntBASIC5.4□□□□□ -1.54
RNF4P78317 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF4P78317 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF4P78317 AC103851.1-201ENST00000506833 274 ntBASIC5.4□□□□□ -1.54
RNF4P78317 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF4P78317 TXNP6-201ENST00000510190 310 ntBASIC5.4□□□□□ -1.54
RNF4P78317 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF4P78317 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF4P78317 AC093677.1-201ENST00000514414 678 ntBASIC5.4□□□□□ -1.54
RNF4P78317 AC097486.1-201ENST00000515331 210 ntBASIC5.4□□□□□ -1.54
RNF4P78317 RNA5SP337-201ENST00000517007 109 ntBASIC5.4□□□□□ -1.54
RNF4P78317 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF4P78317 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.4□□□□□ -1.54
RNF4P78317 AC090572.1-201ENST00000519251 160 ntBASIC5.4□□□□□ -1.54
RNF4P78317 IGLV3-30-201ENST00000524362 298 ntBASIC5.4□□□□□ -1.54
RNF4P78317 AC024224.1-201ENST00000538284 609 ntBASIC5.4□□□□□ -1.54
RNF4P78317 AC023050.3-201ENST00000541142 333 ntBASIC5.4□□□□□ -1.54
RNF4P78317 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF4P78317 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF4P78317 AC011611.1-201ENST00000552179 197 ntBASIC5.4□□□□□ -1.54
RNF4P78317 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF4P78317 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF4P78317 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNF4P78317 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF4P78317 AC005224.3-201ENST00000584683 2140 ntBASIC5.4□□□□□ -1.54
RNF4P78317 AC008521.2-201ENST00000591021 259 ntBASIC5.4□□□□□ -1.54
RNF4P78317 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.4□□□□□ -1.54
RNF4P78317 AP005431.1-201ENST00000618479 319 ntBASIC5.4□□□□□ -1.54
RNF4P78317 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF4P78317 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.55
RNF4P78317 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.4□□□□□ -1.55
RNF4P78317 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
RNF4P78317 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RNF4P78317 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.4□□□□□ -1.55
RNF4P78317 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RNF4P78317 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF4P78317 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF4P78317 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.4□□□□□ -1.55
RNF4P78317 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
RNF4P78317 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF4P78317 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF4P78317 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF4P78317 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF4P78317 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF4P78317 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF4P78317 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF4P78317 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RNF4P78317 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF4P78317 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF4P78317 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF4P78317 RPL7P26-201ENST00000333817 754 ntBASIC5.39□□□□□ -1.55
RNF4P78317 RNU6-108P-201ENST00000365558 107 ntBASIC5.39□□□□□ -1.55
RNF4P78317 SNORA32.2-201ENST00000384049 122 ntBASIC5.39□□□□□ -1.55
RNF4P78317 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF4P78317 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF4P78317 UQCRBP1-201ENST00000421129 336 ntBASIC5.39□□□□□ -1.55
RNF4P78317 AC009965.2-201ENST00000425328 970 ntBASIC5.39□□□□□ -1.55
RNF4P78317 RPL35AP12-201ENST00000425362 338 ntBASIC5.39□□□□□ -1.55
RNF4P78317 AC234779.1-201ENST00000425910 285 ntBASIC5.39□□□□□ -1.55
RNF4P78317 RBMY2QP-201ENST00000429799 1147 ntBASIC5.39□□□□□ -1.55
RNF4P78317 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF4P78317 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.39□□□□□ -1.55
RNF4P78317 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF4P78317 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF4P78317 AL389925.1-201ENST00000432257 728 ntBASIC5.39□□□□□ -1.55
RNF4P78317 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RNF4P78317 AC096775.1-201ENST00000437724 448 ntBASIC5.39□□□□□ -1.55
RNF4P78317 MTND4P19-201ENST00000446659 478 ntBASIC5.39□□□□□ -1.55
RNF4P78317 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF4P78317 AC104073.1-201ENST00000451988 151 ntBASIC5.39□□□□□ -1.55
RNF4P78317 HMGB1P15-201ENST00000453854 435 ntBASIC5.39□□□□□ -1.55
RNF4P78317 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF4P78317 UBFD1P1-201ENST00000473259 814 ntBASIC5.39□□□□□ -1.55
RNF4P78317 RPS17P15-201ENST00000475609 349 ntBASIC5.39□□□□□ -1.55
RNF4P78317 TOMM22P4-201ENST00000511318 336 ntBASIC5.39□□□□□ -1.55
RNF4P78317 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms