Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RAD23BP1-201ENST00000421404 1227 ntBASIC6.09□□□□□ -1.43
USP11P51784 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.09□□□□□ -1.43
USP11P51784 AL445669.1-201ENST00000426743 755 ntBASIC6.09□□□□□ -1.43
USP11P51784 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.09□□□□□ -1.43
USP11P51784 AC024082.2-201ENST00000434771 238 ntBASIC6.09□□□□□ -1.43
USP11P51784 RPL22P17-201ENST00000438729 315 ntBASIC6.09□□□□□ -1.43
USP11P51784 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.09□□□□□ -1.43
USP11P51784 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.09□□□□□ -1.43
USP11P51784 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
USP11P51784 RPS26P39-201ENST00000469206 341 ntBASIC6.09□□□□□ -1.43
USP11P51784 COPS8P2-201ENST00000473228 627 ntBASIC6.09□□□□□ -1.43
USP11P51784 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.09□□□□□ -1.43
USP11P51784 SRP72-202ENST00000504757 745 ntTSL 2 BASIC6.09□□□□□ -1.43
USP11P51784 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.09□□□□□ -1.43
USP11P51784 RNA5SP216-201ENST00000516111 123 ntBASIC6.09□□□□□ -1.43
USP11P51784 RNA5SP373-201ENST00000517271 95 ntBASIC6.09□□□□□ -1.43
USP11P51784 TRMT10BP1-201ENST00000519377 943 ntBASIC6.09□□□□□ -1.43
USP11P51784 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.09□□□□□ -1.43
USP11P51784 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC6.09□□□□□ -1.43
USP11P51784 BRD9P1-201ENST00000529855 560 ntBASIC6.09□□□□□ -1.43
USP11P51784 AC243972.3-201ENST00000539655 198 ntBASIC6.09□□□□□ -1.43
USP11P51784 AC093012.1-202ENST00000549403 582 ntBASIC6.09□□□□□ -1.43
USP11P51784 NMNAT1P1-201ENST00000554095 876 ntBASIC6.09□□□□□ -1.43
USP11P51784 MIR3682-201ENST00000581338 84 ntBASIC6.09□□□□□ -1.43
USP11P51784 AC011840.5-201ENST00000582125 771 ntBASIC6.09□□□□□ -1.43
USP11P51784 MIR544B-201ENST00000582372 78 ntBASIC6.09□□□□□ -1.43
USP11P51784 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.09□□□□□ -1.43
USP11P51784 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.09□□□□□ -1.43
USP11P51784 RNU6ATAC35P-201ENST00000609276 444 ntBASIC6.09□□□□□ -1.43
USP11P51784 MIR1302-1-201ENST00000637932 143 ntBASIC6.09□□□□□ -1.43
USP11P51784 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP11P51784 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP11P51784 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
USP11P51784 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP11P51784 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.09□□□□□ -1.43
USP11P51784 AC108467.2-201ENST00000617640 1597 ntBASIC6.09□□□□□ -1.43
USP11P51784 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP11P51784 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.44
USP11P51784 OR55B1P-203ENST00000641518 2602 ntBASIC6.09□□□□□ -1.44
USP11P51784 AC024560.2-201ENST00000507981 1497 ntBASIC6.09□□□□□ -1.44
USP11P51784 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
USP11P51784 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.08□□□□□ -1.44
USP11P51784 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
USP11P51784 AC006378.2-201ENST00000623178 2476 ntBASIC6.08□□□□□ -1.44
USP11P51784 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USP11P51784 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.08□□□□□ -1.44
USP11P51784 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.08□□□□□ -1.44
USP11P51784 AC005294.1-201ENST00000355509 281 ntBASIC6.08□□□□□ -1.44
USP11P51784 Y_RNA.25-201ENST00000362528 102 ntBASIC6.08□□□□□ -1.44
USP11P51784 RNU6-666P-201ENST00000363499 107 ntBASIC6.08□□□□□ -1.44
USP11P51784 Y_RNA.159-201ENST00000363674 87 ntBASIC6.08□□□□□ -1.44
USP11P51784 RNU6-282P-201ENST00000365357 103 ntBASIC6.08□□□□□ -1.44
USP11P51784 RNU6-359P-201ENST00000365466 108 ntBASIC6.08□□□□□ -1.44
USP11P51784 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
USP11P51784 RNU6-1122P-201ENST00000384449 107 ntBASIC6.08□□□□□ -1.44
USP11P51784 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USP11P51784 AL136133.1-201ENST00000413694 376 ntBASIC6.08□□□□□ -1.44
USP11P51784 EIF1P3-201ENST00000423841 334 ntBASIC6.08□□□□□ -1.44
USP11P51784 NIPA2P1-201ENST00000426223 976 ntBASIC6.08□□□□□ -1.44
USP11P51784 RPL31P35-201ENST00000431058 377 ntBASIC6.08□□□□□ -1.44
USP11P51784 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC6.08□□□□□ -1.44
USP11P51784 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.08□□□□□ -1.44
USP11P51784 RPL7P54-201ENST00000438336 674 ntBASIC6.08□□□□□ -1.44
USP11P51784 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC6.08□□□□□ -1.44
USP11P51784 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.08□□□□□ -1.44
USP11P51784 MRPL50P4-201ENST00000446432 475 ntBASIC6.08□□□□□ -1.44
USP11P51784 BTF3P5-201ENST00000457252 467 ntBASIC6.08□□□□□ -1.44
USP11P51784 AC096741.1-201ENST00000472250 846 ntBASIC6.08□□□□□ -1.44
USP11P51784 RPL36AP51-201ENST00000487216 318 ntBASIC6.08□□□□□ -1.44
USP11P51784 RN7SL629P-201ENST00000489622 285 ntBASIC6.08□□□□□ -1.44
USP11P51784 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC6.08□□□□□ -1.44
USP11P51784 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC6.08□□□□□ -1.44
USP11P51784 RN7SKP13-201ENST00000515933 244 ntBASIC6.08□□□□□ -1.44
USP11P51784 RNU6-941P-201ENST00000516346 108 ntBASIC6.08□□□□□ -1.44
USP11P51784 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.08□□□□□ -1.44
USP11P51784 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.08□□□□□ -1.44
USP11P51784 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.08□□□□□ -1.44
USP11P51784 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
USP11P51784 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.08□□□□□ -1.44
USP11P51784 AC022916.3-201ENST00000592961 742 ntBASIC6.08□□□□□ -1.44
USP11P51784 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.08□□□□□ -1.44
USP11P51784 AC245014.2-201ENST00000603689 287 ntBASIC6.08□□□□□ -1.44
USP11P51784 SUMO2P15-201ENST00000604285 278 ntBASIC6.08□□□□□ -1.44
USP11P51784 AC246785.4-201ENST00000605374 287 ntBASIC6.08□□□□□ -1.44
USP11P51784 AL512329.2-201ENST00000607350 548 ntBASIC6.08□□□□□ -1.44
USP11P51784 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.08□□□□□ -1.44
USP11P51784 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.08□□□□□ -1.44
USP11P51784 AL603758.1-201ENST00000618654 241 ntBASIC6.08□□□□□ -1.44
USP11P51784 AC068722.2-201ENST00000618734 544 ntBASIC6.08□□□□□ -1.44
USP11P51784 C2orf27A-204ENST00000623058 969 ntBASIC6.08□□□□□ -1.44
USP11P51784 AC231657.1-201ENST00000624313 397 ntBASIC6.08□□□□□ -1.44
USP11P51784 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
USP11P51784 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
USP11P51784 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
USP11P51784 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
USP11P51784 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
USP11P51784 AL353796.1-201ENST00000561542 3241 ntBASIC6.08□□□□□ -1.44
USP11P51784 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
USP11P51784 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.08□□□□□ -1.44
USP11P51784 AC003973.3-201ENST00000624863 2822 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms