Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.65□□□□□ -1.83
RORAP35398 MRPS35P3-201ENST00000603189 709 ntBASIC3.65□□□□□ -1.83
RORAP35398 AC015849.2-201ENST00000605738 409 ntBASIC3.65□□□□□ -1.83
RORAP35398 SNORA51-201ENST00000606420 132 ntBASIC3.65□□□□□ -1.83
RORAP35398 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.65□□□□□ -1.83
RORAP35398 AC004775.1-201ENST00000607389 753 ntBASIC3.65□□□□□ -1.83
RORAP35398 U6.48-201ENST00000618523 106 ntBASIC3.65□□□□□ -1.83
RORAP35398 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RORAP35398 AL356490.1-201ENST00000623079 479 ntBASIC3.65□□□□□ -1.83
RORAP35398 AC048347.1-201ENST00000624621 427 ntBASIC3.65□□□□□ -1.83
RORAP35398 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.65□□□□□ -1.83
RORAP35398 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.65□□□□□ -1.83
RORAP35398 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.65□□□□□ -1.83
RORAP35398 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.65□□□□□ -1.83
RORAP35398 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.65□□□□□ -1.83
RORAP35398 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.65□□□□□ -1.83
RORAP35398 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RORAP35398 SEPT7P7-201ENST00000420492 1301 ntBASIC3.65□□□□□ -1.83
RORAP35398 MTND5P3-201ENST00000438536 1800 ntBASIC3.65□□□□□ -1.83
RORAP35398 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RORAP35398 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RORAP35398 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.64□□□□□ -1.83
RORAP35398 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RORAP35398 PRO1804-201ENST00000623780 2050 ntBASIC3.64□□□□□ -1.83
RORAP35398 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RORAP35398 ZNF285B-201ENST00000561698 1767 ntBASIC3.64□□□□□ -1.83
RORAP35398 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RORAP35398 AL133383.2-201ENST00000622958 2336 ntBASIC3.64□□□□□ -1.83
RORAP35398 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.64□□□□□ -1.83
RORAP35398 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.64□□□□□ -1.83
RORAP35398 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.64□□□□□ -1.83
RORAP35398 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.64□□□□□ -1.83
RORAP35398 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.64□□□□□ -1.83
RORAP35398 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.64□□□□□ -1.83
RORAP35398 ARL2BPP3-201ENST00000421226 480 ntBASIC3.64□□□□□ -1.83
RORAP35398 MORF4L1P7-201ENST00000426038 703 ntBASIC3.64□□□□□ -1.83
RORAP35398 AC011742.1-201ENST00000431448 434 ntBASIC3.64□□□□□ -1.83
RORAP35398 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.64□□□□□ -1.83
RORAP35398 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.64□□□□□ -1.83
RORAP35398 AL691517.1-201ENST00000440833 1235 ntBASIC3.64□□□□□ -1.83
RORAP35398 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.64□□□□□ -1.83
RORAP35398 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.64□□□□□ -1.83
RORAP35398 AC022034.3-201ENST00000471393 478 ntBASIC3.64□□□□□ -1.83
RORAP35398 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.64□□□□□ -1.83
RORAP35398 AC078785.3-201ENST00000476607 425 ntBASIC3.64□□□□□ -1.83
RORAP35398 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.64□□□□□ -1.83
RORAP35398 OR52A4P-202ENST00000481634 799 ntBASIC3.64□□□□□ -1.83
RORAP35398 AC104687.1-201ENST00000485829 412 ntBASIC3.64□□□□□ -1.83
RORAP35398 UBE2CP3-201ENST00000502715 450 ntBASIC3.64□□□□□ -1.83
RORAP35398 AC090071.1-201ENST00000507713 644 ntBASIC3.64□□□□□ -1.83
RORAP35398 AC005798.1-201ENST00000513715 387 ntBASIC3.64□□□□□ -1.83
RORAP35398 RNU1-95P-201ENST00000516357 160 ntBASIC3.64□□□□□ -1.83
RORAP35398 RNA5SP164-201ENST00000516533 110 ntBASIC3.64□□□□□ -1.83
RORAP35398 SNORA31.13-201ENST00000516624 135 ntBASIC3.64□□□□□ -1.83
RORAP35398 RNU1-128P-201ENST00000516704 160 ntBASIC3.64□□□□□ -1.83
RORAP35398 IGKV2-23-201ENST00000518729 323 ntBASIC3.64□□□□□ -1.83
RORAP35398 AC026403.1-201ENST00000518938 295 ntBASIC3.64□□□□□ -1.83
RORAP35398 AC007991.1-201ENST00000522680 631 ntBASIC3.64□□□□□ -1.83
RORAP35398 AC004923.2-201ENST00000529649 369 ntBASIC3.64□□□□□ -1.83
RORAP35398 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.64□□□□□ -1.83
RORAP35398 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RORAP35398 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.64□□□□□ -1.83
RORAP35398 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.64□□□□□ -1.83
RORAP35398 AL121594.4-201ENST00000556211 1196 ntBASIC3.64□□□□□ -1.83
RORAP35398 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.64□□□□□ -1.83
RORAP35398 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
RORAP35398 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.64□□□□□ -1.83
RORAP35398 AC008739.3-201ENST00000603262 127 ntBASIC3.64□□□□□ -1.83
RORAP35398 AC005972.3-201ENST00000606304 481 ntBASIC3.64□□□□□ -1.83
RORAP35398 AP003392.5-201ENST00000607857 415 ntBASIC3.64□□□□□ -1.83
RORAP35398 AL118508.4-201ENST00000624142 1176 ntBASIC3.64□□□□□ -1.83
RORAP35398 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.64□□□□□ -1.83
RORAP35398 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RORAP35398 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.64□□□□□ -1.83
RORAP35398 IPO8P1-201ENST00000455509 3109 ntBASIC3.64□□□□□ -1.83
RORAP35398 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
RORAP35398 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.64□□□□□ -1.83
RORAP35398 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RORAP35398 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.64□□□□□ -1.83
RORAP35398 BDP1P-201ENST00000582658 1990 ntBASIC3.63□□□□□ -1.83
RORAP35398 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.63□□□□□ -1.83
RORAP35398 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RORAP35398 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RORAP35398 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RORAP35398 RPL21P17-201ENST00000397467 475 ntBASIC3.63□□□□□ -1.83
RORAP35398 DNAJC19P6-201ENST00000401853 280 ntBASIC3.63□□□□□ -1.83
RORAP35398 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.63□□□□□ -1.83
RORAP35398 MTCO3P4-201ENST00000419236 787 ntBASIC3.63□□□□□ -1.83
RORAP35398 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RORAP35398 FO393419.3-201ENST00000428741 282 ntBASIC3.63□□□□□ -1.83
RORAP35398 AC087650.1-201ENST00000431445 468 ntBASIC3.63□□□□□ -1.83
RORAP35398 AL035458.1-201ENST00000433096 585 ntBASIC3.63□□□□□ -1.83
RORAP35398 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.63□□□□□ -1.83
RORAP35398 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.63□□□□□ -1.83
RORAP35398 TPTE2P6-202ENST00000445572 1007 ntBASIC3.63□□□□□ -1.83
RORAP35398 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.63□□□□□ -1.83
RORAP35398 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.63□□□□□ -1.83
RORAP35398 AL136097.1-201ENST00000456945 913 ntBASIC3.63□□□□□ -1.83
RORAP35398 AC078918.1-201ENST00000498515 228 ntBASIC3.63□□□□□ -1.83
RORAP35398 AC026726.1-201ENST00000512859 601 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms