Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.23□□□□□ -1.57
SMARCA1P28370 PGBD4P4-201ENST00000509673 613 ntBASIC5.23□□□□□ -1.57
SMARCA1P28370 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.23□□□□□ -1.57
SMARCA1P28370 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.23□□□□□ -1.57
SMARCA1P28370 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.23□□□□□ -1.57
SMARCA1P28370 AC022882.1-201ENST00000532142 501 ntBASIC5.23□□□□□ -1.57
SMARCA1P28370 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.23□□□□□ -1.57
SMARCA1P28370 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMARCA1P28370 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.23□□□□□ -1.57
SMARCA1P28370 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.23□□□□□ -1.57
SMARCA1P28370 RPL7P50-201ENST00000600588 727 ntBASIC5.23□□□□□ -1.57
SMARCA1P28370 AC008745.1-201ENST00000604064 271 ntBASIC5.23□□□□□ -1.57
SMARCA1P28370 AC008966.2-201ENST00000606157 453 ntBASIC5.23□□□□□ -1.57
SMARCA1P28370 AC012409.3-201ENST00000611343 981 ntBASIC5.23□□□□□ -1.57
SMARCA1P28370 LINC00901.1-201ENST00000617252 152 ntBASIC5.23□□□□□ -1.57
SMARCA1P28370 MIR6891-201ENST00000618788 93 ntBASIC5.23□□□□□ -1.57
SMARCA1P28370 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.23□□□□□ -1.57
SMARCA1P28370 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.23□□□□□ -1.57
SMARCA1P28370 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.23□□□□□ -1.57
SMARCA1P28370 MIR7641-1-201ENST00000627518 61 ntBASIC5.23□□□□□ -1.57
SMARCA1P28370 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.23□□□□□ -1.57
SMARCA1P28370 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SMARCA1P28370 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.23□□□□□ -1.57
SMARCA1P28370 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SMARCA1P28370 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SMARCA1P28370 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SMARCA1P28370 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SMARCA1P28370 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMARCA1P28370 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMARCA1P28370 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SMARCA1P28370 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMARCA1P28370 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMARCA1P28370 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.22□□□□□ -1.57
SMARCA1P28370 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMARCA1P28370 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMARCA1P28370 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.22□□□□□ -1.57
SMARCA1P28370 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SMARCA1P28370 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SMARCA1P28370 Y_RNA.77-201ENST00000362962 107 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 SNORD116-4-201ENST00000384733 96 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.22□□□□□ -1.57
SMARCA1P28370 RPS3AP26-201ENST00000398259 784 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 AL031577.2-201ENST00000404133 280 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.22□□□□□ -1.57
SMARCA1P28370 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.22□□□□□ -1.57
SMARCA1P28370 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMARCA1P28370 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMARCA1P28370 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.22□□□□□ -1.57
SMARCA1P28370 RPS25P9-201ENST00000435591 252 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMARCA1P28370 TAF9P1-201ENST00000445421 515 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.22□□□□□ -1.57
SMARCA1P28370 TPT1P13-201ENST00000449760 499 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 TAF9P2-201ENST00000454958 515 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 RPL5P30-201ENST00000465511 891 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 AC010307.1-201ENST00000467206 836 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 AC006463.2-201ENST00000473326 348 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.22□□□□□ -1.57
SMARCA1P28370 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.22□□□□□ -1.57
SMARCA1P28370 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.22□□□□□ -1.57
SMARCA1P28370 RPL30P11-201ENST00000495304 339 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 ARL4AP1-201ENST00000503220 705 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.22□□□□□ -1.57
SMARCA1P28370 AP001207.1-201ENST00000524051 481 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 DYNLL1P4-201ENST00000549314 266 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 TRAV15-201ENST00000556680 249 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.22□□□□□ -1.57
SMARCA1P28370 AC138915.2-201ENST00000569776 97 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.22□□□□□ -1.57
SMARCA1P28370 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.22□□□□□ -1.57
SMARCA1P28370 AC068790.2-201ENST00000602601 557 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 AC233280.2-201ENST00000603917 1070 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 AL136981.2-201ENST00000617319 734 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 MKKS-204ENST00000639674 192 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SMARCA1P28370 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SMARCA1P28370 NOL8P1-201ENST00000508336 3529 ntBASIC5.22□□□□□ -1.57
SMARCA1P28370 AC006971.1-201ENST00000407916 4486 ntBASIC5.21□□□□□ -1.57
SMARCA1P28370 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
SMARCA1P28370 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SMARCA1P28370 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SMARCA1P28370 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SMARCA1P28370 RNU6-492P-201ENST00000363035 104 ntBASIC5.21□□□□□ -1.58
SMARCA1P28370 RNU1-32P-201ENST00000363937 159 ntBASIC5.21□□□□□ -1.58
SMARCA1P28370 RNA5SP151-201ENST00000365632 117 ntBASIC5.21□□□□□ -1.58
SMARCA1P28370 SUGT1P1-201ENST00000379514 476 ntBASIC5.21□□□□□ -1.58
SMARCA1P28370 PIGPP2-201ENST00000411569 458 ntBASIC5.21□□□□□ -1.58
SMARCA1P28370 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.21□□□□□ -1.58
SMARCA1P28370 FCF1P2-201ENST00000415284 583 ntBASIC5.21□□□□□ -1.58
SMARCA1P28370 AL807761.1-201ENST00000417622 171 ntBASIC5.21□□□□□ -1.58
SMARCA1P28370 RPL7AP25-201ENST00000423357 805 ntBASIC5.21□□□□□ -1.58
SMARCA1P28370 CENPIP1-201ENST00000425713 902 ntBASIC5.21□□□□□ -1.58
SMARCA1P28370 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.21□□□□□ -1.58
SMARCA1P28370 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.21□□□□□ -1.58
SMARCA1P28370 NF1P3-201ENST00000457709 450 ntBASIC5.21□□□□□ -1.58
SMARCA1P28370 RNA5SP464-201ENST00000516251 108 ntBASIC5.21□□□□□ -1.58
SMARCA1P28370 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.21□□□□□ -1.58
SMARCA1P28370 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.21□□□□□ -1.58
SMARCA1P28370 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.21□□□□□ -1.58
SMARCA1P28370 AC007115.1-201ENST00000546853 234 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms