Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.63□□□□□ -1.67
BDNFP23560 AL162151.2-201ENST00000448875 158 ntBASIC4.63□□□□□ -1.67
BDNFP23560 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.63□□□□□ -1.67
BDNFP23560 RPS6P4-201ENST00000494693 758 ntBASIC4.63□□□□□ -1.67
BDNFP23560 RPL23AP55-201ENST00000498163 452 ntBASIC4.63□□□□□ -1.67
BDNFP23560 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.63□□□□□ -1.67
BDNFP23560 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.63□□□□□ -1.67
BDNFP23560 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
BDNFP23560 RNU6-1028P-201ENST00000517164 93 ntBASIC4.63□□□□□ -1.67
BDNFP23560 AC138701.1-201ENST00000524329 714 ntBASIC4.63□□□□□ -1.67
BDNFP23560 MTCO3P15-201ENST00000526563 574 ntBASIC4.63□□□□□ -1.67
BDNFP23560 AP001189.2-201ENST00000527320 189 ntBASIC4.63□□□□□ -1.67
BDNFP23560 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.63□□□□□ -1.67
BDNFP23560 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
BDNFP23560 AC087897.1-201ENST00000550134 156 ntBASIC4.63□□□□□ -1.67
BDNFP23560 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.63□□□□□ -1.67
BDNFP23560 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
BDNFP23560 AC069366.1-201ENST00000583159 838 ntBASIC4.63□□□□□ -1.67
BDNFP23560 AC011492.1-201ENST00000600023 315 ntBASIC4.63□□□□□ -1.67
BDNFP23560 AC092574.1-201ENST00000609771 420 ntBASIC4.63□□□□□ -1.67
BDNFP23560 AL731566.2-201ENST00000618971 317 ntBASIC4.63□□□□□ -1.67
BDNFP23560 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.63□□□□□ -1.67
BDNFP23560 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.63□□□□□ -1.67
BDNFP23560 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.63□□□□□ -1.67
BDNFP23560 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.63□□□□□ -1.67
BDNFP23560 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BDNFP23560 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
BDNFP23560 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
BDNFP23560 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BDNFP23560 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
BDNFP23560 AL672296.1-201ENST00000427780 2158 ntBASIC4.63□□□□□ -1.67
BDNFP23560 Z99496.1-201ENST00000469424 1477 ntBASIC4.62□□□□□ -1.67
BDNFP23560 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
BDNFP23560 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
BDNFP23560 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.62□□□□□ -1.67
BDNFP23560 AL158163.1-201ENST00000603915 1649 ntBASIC4.62□□□□□ -1.67
BDNFP23560 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.62□□□□□ -1.67
BDNFP23560 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
BDNFP23560 RNU6-50P-201ENST00000362356 103 ntBASIC4.62□□□□□ -1.67
BDNFP23560 RNA5SP258-201ENST00000362750 119 ntBASIC4.62□□□□□ -1.67
BDNFP23560 RNU6-1249P-201ENST00000363237 111 ntBASIC4.62□□□□□ -1.67
BDNFP23560 RNU1-132P-201ENST00000364300 164 ntBASIC4.62□□□□□ -1.67
BDNFP23560 SNORD82-201ENST00000365530 70 ntBASIC4.62□□□□□ -1.67
BDNFP23560 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
BDNFP23560 RNU6-1300P-201ENST00000391046 108 ntBASIC4.62□□□□□ -1.67
BDNFP23560 AL583835.1-201ENST00000399570 407 ntBASIC4.62□□□□□ -1.67
BDNFP23560 AC097374.1-203ENST00000400783 485 ntBASIC4.62□□□□□ -1.67
BDNFP23560 RPL23AP26-201ENST00000412728 464 ntBASIC4.62□□□□□ -1.67
BDNFP23560 RPS7P9-201ENST00000414704 586 ntBASIC4.62□□□□□ -1.67
BDNFP23560 RAC1P3-201ENST00000416129 580 ntBASIC4.62□□□□□ -1.67
BDNFP23560 BOLA3P4-201ENST00000418151 400 ntBASIC4.62□□□□□ -1.67
BDNFP23560 FNDC3CP-201ENST00000420795 1155 ntBASIC4.62□□□□□ -1.67
BDNFP23560 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.62□□□□□ -1.67
BDNFP23560 MTCO1P3-201ENST00000429327 192 ntBASIC4.62□□□□□ -1.67
BDNFP23560 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.62□□□□□ -1.67
BDNFP23560 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.62□□□□□ -1.67
BDNFP23560 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.62□□□□□ -1.67
BDNFP23560 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.62□□□□□ -1.67
BDNFP23560 MTCYBP42-201ENST00000444653 1130 ntBASIC4.62□□□□□ -1.67
BDNFP23560 VN1R32P-201ENST00000452234 905 ntBASIC4.62□□□□□ -1.67
BDNFP23560 snoU13.24-201ENST00000458998 104 ntBASIC4.62□□□□□ -1.67
BDNFP23560 RPL35AP15-201ENST00000468042 339 ntBASIC4.62□□□□□ -1.67
BDNFP23560 RPL7P1-201ENST00000468161 747 ntBASIC4.62□□□□□ -1.67
BDNFP23560 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.62□□□□□ -1.67
BDNFP23560 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.62□□□□□ -1.67
BDNFP23560 AC093267.1-201ENST00000489176 961 ntBASIC4.62□□□□□ -1.67
BDNFP23560 AL024509.2-201ENST00000493462 493 ntBASIC4.62□□□□□ -1.67
BDNFP23560 RN7SL812P-201ENST00000493791 279 ntBASIC4.62□□□□□ -1.67
BDNFP23560 PRELID3BP5-201ENST00000508612 460 ntBASIC4.62□□□□□ -1.67
BDNFP23560 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.62□□□□□ -1.67
BDNFP23560 AC027309.2-201ENST00000520566 192 ntBASIC4.62□□□□□ -1.67
BDNFP23560 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.62□□□□□ -1.67
BDNFP23560 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.62□□□□□ -1.67
BDNFP23560 AL121603.1-201ENST00000553815 142 ntBASIC4.62□□□□□ -1.67
BDNFP23560 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
BDNFP23560 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BDNFP23560 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.62□□□□□ -1.67
BDNFP23560 AC107982.3-201ENST00000584957 985 ntBASIC4.62□□□□□ -1.67
BDNFP23560 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.62□□□□□ -1.67
BDNFP23560 IPO5P1-202ENST00000600039 287 ntBASIC4.62□□□□□ -1.67
BDNFP23560 AL354984.3-201ENST00000604803 325 ntBASIC4.62□□□□□ -1.67
BDNFP23560 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BDNFP23560 AC103710.3-201ENST00000608157 948 ntBASIC4.62□□□□□ -1.67
BDNFP23560 AC093673.2-201ENST00000609674 331 ntBASIC4.62□□□□□ -1.67
BDNFP23560 AC006329.2-201ENST00000611491 394 ntBASIC4.62□□□□□ -1.67
BDNFP23560 MIR6716-201ENST00000613413 80 ntBASIC4.62□□□□□ -1.67
BDNFP23560 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.62□□□□□ -1.67
BDNFP23560 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
BDNFP23560 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.62□□□□□ -1.67
BDNFP23560 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.62□□□□□ -1.67
BDNFP23560 AC140479.6-201ENST00000633535 357 ntBASIC4.62□□□□□ -1.67
BDNFP23560 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
BDNFP23560 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BDNFP23560 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.62□□□□□ -1.67
BDNFP23560 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BDNFP23560 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BDNFP23560 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BDNFP23560 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
BDNFP23560 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.61□□□□□ -1.67
BDNFP23560 RNA5SP307-201ENST00000362863 116 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms