Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CD74P04233 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CD74P04233 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.14□□□□□ -1.91
CD74P04233 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CD74P04233 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.13□□□□□ -1.91
CD74P04233 AC011978.2-201ENST00000569835 2054 ntBASIC3.13□□□□□ -1.91
CD74P04233 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.13□□□□□ -1.91
CD74P04233 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CD74P04233 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CD74P04233 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CD74P04233 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CD74P04233 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CD74P04233 SNORD51.1-201ENST00000365405 77 ntBASIC3.13□□□□□ -1.91
CD74P04233 RNA5SP235-201ENST00000365411 114 ntBASIC3.13□□□□□ -1.91
CD74P04233 AP002088.1-201ENST00000382740 395 ntBASIC3.13□□□□□ -1.91
CD74P04233 OR6C69P-201ENST00000394268 893 ntBASIC3.13□□□□□ -1.91
CD74P04233 EI24P2-201ENST00000397776 1076 ntBASIC3.13□□□□□ -1.91
CD74P04233 DNAJC19P6-201ENST00000401853 280 ntBASIC3.13□□□□□ -1.91
CD74P04233 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.13□□□□□ -1.91
CD74P04233 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.13□□□□□ -1.91
CD74P04233 LINC01881-201ENST00000416103 412 ntBASIC3.13□□□□□ -1.91
CD74P04233 AC234782.4-201ENST00000417646 1048 ntBASIC3.13□□□□□ -1.91
CD74P04233 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.13□□□□□ -1.91
CD74P04233 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.13□□□□□ -1.91
CD74P04233 AC004975.1-201ENST00000428733 208 ntBASIC3.13□□□□□ -1.91
CD74P04233 ZNF965P-201ENST00000432501 817 ntBASIC3.13□□□□□ -1.91
CD74P04233 AL356276.2-201ENST00000435919 558 ntBASIC3.13□□□□□ -1.91
CD74P04233 AC006994.1-201ENST00000438212 839 ntBASIC3.13□□□□□ -1.91
CD74P04233 MTCYBP31-201ENST00000438855 1122 ntBASIC3.13□□□□□ -1.91
CD74P04233 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.13□□□□□ -1.91
CD74P04233 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.13□□□□□ -1.91
CD74P04233 NUTF2P7-201ENST00000453086 375 ntBASIC3.13□□□□□ -1.91
CD74P04233 RN7SL330P-201ENST00000469709 307 ntBASIC3.13□□□□□ -1.91
CD74P04233 RPS3AP6-201ENST00000484430 795 ntBASIC3.13□□□□□ -1.91
CD74P04233 AC093663.2-201ENST00000484625 313 ntBASIC3.13□□□□□ -1.91
CD74P04233 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.13□□□□□ -1.91
CD74P04233 AC091167.1-201ENST00000492017 396 ntBASIC3.13□□□□□ -1.91
CD74P04233 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.13□□□□□ -1.91
CD74P04233 AC110768.1-201ENST00000509222 400 ntBASIC3.13□□□□□ -1.91
CD74P04233 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.13□□□□□ -1.91
CD74P04233 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.13□□□□□ -1.91
CD74P04233 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.13□□□□□ -1.91
CD74P04233 RN7SKP21-201ENST00000516503 220 ntBASIC3.13□□□□□ -1.91
CD74P04233 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.13□□□□□ -1.91
CD74P04233 IGKV2-36-201ENST00000519999 223 ntBASIC3.13□□□□□ -1.91
CD74P04233 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.13□□□□□ -1.91
CD74P04233 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.13□□□□□ -1.91
CD74P04233 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.13□□□□□ -1.91
CD74P04233 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CD74P04233 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.13□□□□□ -1.91
CD74P04233 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.13□□□□□ -1.91
CD74P04233 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.13□□□□□ -1.91
CD74P04233 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.13□□□□□ -1.91
CD74P04233 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
CD74P04233 OR52H1-202ENST00000641796 1061 ntBASIC3.13□□□□□ -1.91
CD74P04233 AC024560.2-201ENST00000507981 1497 ntBASIC3.13□□□□□ -1.91
CD74P04233 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CD74P04233 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.13□□□□□ -1.91
CD74P04233 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CD74P04233 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CD74P04233 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CD74P04233 CASC19-261ENST00000641853 1638 ntBASIC3.12□□□□□ -1.91
CD74P04233 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CD74P04233 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CD74P04233 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CD74P04233 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.12□□□□□ -1.91
CD74P04233 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CD74P04233 AL353692.2-201ENST00000407054 335 ntBASIC3.12□□□□□ -1.91
CD74P04233 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.12□□□□□ -1.91
CD74P04233 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.12□□□□□ -1.91
CD74P04233 COX6CP15-201ENST00000426313 211 ntBASIC3.12□□□□□ -1.91
CD74P04233 FAR1P1-201ENST00000427163 934 ntBASIC3.12□□□□□ -1.91
CD74P04233 MRPL50P1-201ENST00000431951 384 ntBASIC3.12□□□□□ -1.91
CD74P04233 RPL21P112-201ENST00000434403 463 ntBASIC3.12□□□□□ -1.91
CD74P04233 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.12□□□□□ -1.91
CD74P04233 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.12□□□□□ -1.91
CD74P04233 ARL5AP2-201ENST00000444698 533 ntBASIC3.12□□□□□ -1.91
CD74P04233 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CD74P04233 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.12□□□□□ -1.91
CD74P04233 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.12□□□□□ -1.91
CD74P04233 AC096992.1-201ENST00000459808 709 ntBASIC3.12□□□□□ -1.91
CD74P04233 RPL21P104-201ENST00000464143 478 ntBASIC3.12□□□□□ -1.91
CD74P04233 AC020893.1-201ENST00000502452 580 ntBASIC3.12□□□□□ -1.91
CD74P04233 AC025459.1-201ENST00000504072 156 ntBASIC3.12□□□□□ -1.91
CD74P04233 AC111193.1-201ENST00000504097 155 ntBASIC3.12□□□□□ -1.91
CD74P04233 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.12□□□□□ -1.91
CD74P04233 AC093755.1-201ENST00000512950 1023 ntBASIC3.12□□□□□ -1.91
CD74P04233 RNA5SP164-201ENST00000516533 110 ntBASIC3.12□□□□□ -1.91
CD74P04233 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.12□□□□□ -1.91
CD74P04233 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.12□□□□□ -1.91
CD74P04233 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.12□□□□□ -1.91
CD74P04233 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.12□□□□□ -1.91
CD74P04233 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.12□□□□□ -1.91
CD74P04233 AL121766.1-201ENST00000547436 487 ntBASIC3.12□□□□□ -1.91
CD74P04233 AC025260.1-201ENST00000548858 430 ntBASIC3.12□□□□□ -1.91
CD74P04233 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.12□□□□□ -1.91
CD74P04233 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.12□□□□□ -1.91
CD74P04233 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.12□□□□□ -1.91
CD74P04233 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.12□□□□□ -1.91
CD74P04233 AC040174.2-201ENST00000602701 465 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms