Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AC233266.2-201ENST00000567067 528 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AC120057.2-201ENST00000571520 271 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 OR4H6P-202ENST00000603819 340 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AL355816.1-201ENST00000607951 118 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AC005962.2-201ENST00000611427 652 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 MIR6500-201ENST00000622700 86 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AC010435.1-201ENST00000623353 1177 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 MIR7641-1-201ENST00000627518 61 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 METTL21EP-201ENST00000298105 713 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 RNU6-213P-201ENST00000384051 104 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 RPL21P3-201ENST00000395517 478 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AL356057.1-202ENST00000402263 756 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 SNORA3.3-201ENST00000408712 125 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AL031663.1-201ENST00000437445 219 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 TPMTP4-201ENST00000450749 678 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AC146507.2-201ENST00000460608 476 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 RPS7P7-201ENST00000463499 571 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 RPL7P19-201ENST00000469948 618 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AC006511.1-201ENST00000470614 315 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 TRAV31-201ENST00000502780 342 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AC118282.1-201ENST00000506408 765 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AC010285.3-201ENST00000511668 676 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AC119751.1-201ENST00000513357 765 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 RNU1-143P-201ENST00000516296 146 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 CDH12P4-201ENST00000517835 295 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 CDH12P3-201ENST00000517935 295 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 CDH12P1-201ENST00000518435 295 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AC107934.2-201ENST00000518653 310 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 C1GALT1P3-201ENST00000522049 819 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 CR383656.6-201ENST00000550518 394 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 SNRPGP1-201ENST00000553864 222 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AC115085.1-201ENST00000588924 229 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 U1.23-201ENST00000610293 146 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 MIR6716-201ENST00000613413 80 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 RNU1-68P-201ENST00000615382 146 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 MLECP1-201ENST00000615893 709 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 U1.39-201ENST00000621562 146 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 CR392039.4-201ENST00000624968 501 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQB1P01920 OTUD4P1-201ENST00000237841 3067 ntBASIC3.05□□□□□ -1.92
HLA-DQB1P01920 MFSD8-236ENST00000641509 4050 ntBASIC3.04□□□□□ -1.92
HLA-DQB1P01920 MFSD8-233ENST00000641482 4860 ntBASIC3.04□□□□□ -1.92
HLA-DQB1P01920 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQB1P01920 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQB1P01920 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DQB1P01920 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQB1P01920 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQB1P01920 RPL7P26-201ENST00000333817 754 ntBASIC3.04□□□□□ -1.92
HLA-DQB1P01920 U3.15-201ENST00000365398 212 ntBASIC3.04□□□□□ -1.92
HLA-DQB1P01920 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQB1P01920 MIR585-201ENST00000384887 94 ntBASIC3.04□□□□□ -1.92
HLA-DQB1P01920 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DQB1P01920 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQB1P01920 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQB1P01920 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQB1P01920 MTCYBP31-201ENST00000438855 1122 ntBASIC3.04□□□□□ -1.92
HLA-DQB1P01920 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQB1P01920 AC010655.1-201ENST00000449336 292 ntBASIC3.04□□□□□ -1.92
HLA-DQB1P01920 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DQB1P01920 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQB1P01920 CEACAMP4-201ENST00000457676 421 ntBASIC3.04□□□□□ -1.92
HLA-DQB1P01920 AC108729.2-201ENST00000476543 840 ntBASIC3.04□□□□□ -1.92
HLA-DQB1P01920 AL161747.1-201ENST00000480068 358 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms