Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AC104073.1-201ENST00000451988 151 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 HMGB1P15-201ENST00000453854 435 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 RAD23BP3-201ENST00000454157 1152 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 RN7SL51P-201ENST00000468230 285 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 RN7SL799P-201ENST00000475891 298 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXA3O43365 RPS4XP18-201ENST00000495480 763 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 NIFKP7-201ENST00000503365 834 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 MTCO2P30-201ENST00000503662 364 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXA3O43365 TXNP6-201ENST00000510190 310 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 AC074255.1-201ENST00000511259 501 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
HOXA3O43365 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXA3O43365 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXA3O43365 OR5AN2P-201ENST00000534535 896 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HOXA3O43365 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXA3O43365 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXA3O43365 ANP32BP3-201ENST00000559213 706 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.58□□□□□ -1.68
HOXA3O43365 AC096996.1-201ENST00000563813 325 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 AC009117.1-201ENST00000563948 554 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXA3O43365 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXA3O43365 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXA3O43365 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXA3O43365 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXA3O43365 FKBP1AP1-201ENST00000594588 318 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 AC123786.2-201ENST00000603459 275 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 RPL23AP92-201ENST00000603609 255 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 AL391813.2-201ENST00000609113 322 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 AC090527.3-201ENST00000619041 548 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 AC091953.2-201ENST00000623979 160 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 AC024614.3-201ENST00000637860 256 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXA3O43365 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXA3O43365 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HOXA3O43365 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXA3O43365 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXA3O43365 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXA3O43365 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXA3O43365 C4BPAP1-201ENST00000415474 1893 ntBASIC4.58□□□□□ -1.68
HOXA3O43365 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXA3O43365 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXA3O43365 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXA3O43365 AC097714.1-201ENST00000511272 1647 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXA3O43365 AC018809.2-201ENST00000602436 3823 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 AL138820.1-201ENST00000617901 5305 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.57□□□□□ -1.68
HOXA3O43365 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXA3O43365 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXA3O43365 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXA3O43365 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HOXA3O43365 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HOXA3O43365 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXA3O43365 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXA3O43365 RPS4XP5-202ENST00000449995 1334 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXA3O43365 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HOXA3O43365 Y_RNA.86-201ENST00000363020 111 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 RNU1-19P-201ENST00000363306 165 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 RNY3P3-201ENST00000363816 102 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 RNU1-39P-201ENST00000383897 165 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 SNORA20.2-201ENST00000383922 131 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 RNU6-456P-201ENST00000384493 107 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 AL356421.1-201ENST00000403255 413 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 RNU4-34P-201ENST00000410431 124 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 AC069218.2-201ENST00000411665 344 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 AC073136.2-201ENST00000417282 849 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 MTATP6P18-201ENST00000417994 673 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 AC015977.1-201ENST00000418887 292 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 RPL31P45-201ENST00000419532 356 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXA3O43365 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXA3O43365 COX6CP15-201ENST00000426313 211 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXA3O43365 AL590399.2-201ENST00000427536 309 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXA3O43365 AL590233.1-201ENST00000430017 456 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 AP1S2P1-201ENST00000457344 379 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 PLGLA-201ENST00000465668 449 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 AC093267.1-201ENST00000489176 961 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 AC011005.3-201ENST00000491624 395 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXA3O43365 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXA3O43365 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXA3O43365 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXA3O43365 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXA3O43365 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXA3O43365 AL138976.2-201ENST00000563989 694 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 NF1P5-201ENST00000588287 448 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXA3O43365 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXA3O43365 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.57□□□□□ -1.68
HOXA3O43365 AC005191.1-201ENST00000603950 358 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 IMMP1LP3-201ENST00000604197 224 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 AC008966.2-201ENST00000606157 453 ntBASIC4.57□□□□□ -1.68
HOXA3O43365 AC123768.4-201ENST00000616244 701 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms