Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RPS7P7-201ENST00000463499 571 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 RPS23P7-201ENST00000466210 444 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 PPIAP15-201ENST00000479662 484 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AC004069.2-201ENST00000505438 1114 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AC005798.1-201ENST00000513715 387 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 RN7SKP122-201ENST00000515923 296 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 HIGD1AP10-201ENST00000527837 282 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AC027104.1-201ENST00000563702 681 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 MTCYBP28-201ENST00000566728 1132 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AC125494.3-201ENST00000602759 455 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AL009028.1-201ENST00000604895 802 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AL591034.3-201ENST00000605511 685 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AC025016.1-201ENST00000616746 682 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AC018926.3-201ENST00000618841 406 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AC112484.5-201ENST00000624189 228 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AC244205.2-202ENST00000635781 342 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 MIR492-201ENST00000638676 116 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AP002001.2-201ENST00000529025 1469 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 ELL2P4-201ENST00000446870 1376 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 ZNF37BP-203ENST00000452306 1352 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.38□□□□□ -1.87
RHBDD3Q9Y3P4 AC107081.3-201ENST00000612715 2034 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 HLFP1-201ENST00000402375 499 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 Z98941.1-201ENST00000407764 100 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 UBE2V1P11-201ENST00000411559 285 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 CRYBB2P1-203ENST00000415709 538 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 MTND4LP14-201ENST00000429447 288 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 AL662791.1-201ENST00000441992 928 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 MRPL35P4-201ENST00000453682 566 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 MTCO3P35-201ENST00000485582 781 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 AC110792.1-201ENST00000491826 472 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 HMGB1P23-201ENST00000518743 568 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 EIF1P6-201ENST00000600054 334 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 AL136295.6-201ENST00000610486 658 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 AC006338.2-201ENST00000616864 791 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 AC024595.1-201ENST00000623088 387 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 AP001350.1-201ENST00000601906 1524 ntBASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.37□□□□□ -1.87
RHBDD3Q9Y3P4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AC024560.2-201ENST00000507981 1497 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 MIR423-201ENST00000362201 94 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 RPL21P65-201ENST00000406094 466 ntBASIC3.36□□□□□ -1.87
RHBDD3Q9Y3P4 AC092745.2-202ENST00000411880 369 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms