Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL035246.1-201ENST00000433554 1255 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 TPTE2P6-202ENST00000445572 1007 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 CEACAMP6-201ENST00000452007 574 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 NANOGP10-201ENST00000453325 895 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 CDC42P1-201ENST00000456658 548 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 RPL35P6-201ENST00000490024 372 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AC093824.1-201ENST00000508796 343 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AC104108.1-201ENST00000509930 412 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 PRELID3BP4-201ENST00000515476 571 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AP000676.2-201ENST00000529711 301 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 MIR4330-201ENST00000579077 105 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 MIR3934-201ENST00000579806 107 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AL049634.3-201ENST00000604968 457 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 MIR6820-201ENST00000611508 62 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 RNVU1-4-201ENST00000612985 164 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AC123767.1-202ENST00000620407 817 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AC068870.2-201ENST00000620635 389 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AL109659.3-201ENST00000624985 950 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AL355578.1-201ENST00000607405 1328 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AC100871.1-201ENST00000507871 1456 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 AC116667.1-201ENST00000604855 2072 ntBASIC3.85□□□□□ -1.79
NDE1Q9NXR1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 RNU6-224P-201ENST00000384055 107 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC092745.2-202ENST00000411880 369 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 MTCYBP15-201ENST00000433123 1127 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 USP9YP24-201ENST00000434374 697 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC006011.1-201ENST00000442758 349 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 USP9YP17-201ENST00000444617 696 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AL929288.2-201ENST00000446368 407 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 PTGES3P5-201ENST00000455109 434 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC004801.2-202ENST00000463559 283 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC011037.1-201ENST00000483964 558 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 RPL7P24-201ENST00000493052 752 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 RPL21P131-201ENST00000497298 483 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC091860.1-201ENST00000505723 432 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 IGBP1P5-201ENST00000507524 1000 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC119751.1-201ENST00000513357 765 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC110775.1-201ENST00000513721 462 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 RN7SKP287-201ENST00000516546 266 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 LRRC34P1-201ENST00000542742 915 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC025627.2-201ENST00000576220 160 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 MIR4458-201ENST00000578872 75 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 MIR5684-201ENST00000585074 65 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC005255.1-201ENST00000593748 216 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC234772.3-201ENST00000602277 528 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC104785.1-201ENST00000603220 588 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AL392112.1-201ENST00000605115 829 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 BRDTP1-201ENST00000605735 677 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AL445222.1-201ENST00000607259 628 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC023043.4-201ENST00000612081 449 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.84□□□□□ -1.79
NDE1Q9NXR1 U6.48-201ENST00000618523 106 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 C2orf27A-204ENST00000623058 969 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 AC091905.1-201ENST00000624400 311 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.84□□□□□ -1.79
NDE1Q9NXR1 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.84□□□□□ -1.8
NDE1Q9NXR1 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
NDE1Q9NXR1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
NDE1Q9NXR1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms