Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC091951.2-201ENST00000500762 203 ntBASIC5.36□□□□□ -1.55
CD248Q9HCU0 MTCYBP17-201ENST00000503579 789 ntBASIC5.36□□□□□ -1.55
CD248Q9HCU0 AC025459.1-201ENST00000504072 156 ntBASIC5.36□□□□□ -1.55
CD248Q9HCU0 MTND3P22-201ENST00000510932 243 ntBASIC5.36□□□□□ -1.55
CD248Q9HCU0 RN7SKP147-201ENST00000517154 244 ntBASIC5.36□□□□□ -1.55
CD248Q9HCU0 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.36□□□□□ -1.55
CD248Q9HCU0 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.36□□□□□ -1.55
CD248Q9HCU0 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CD248Q9HCU0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.36□□□□□ -1.55
CD248Q9HCU0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.36□□□□□ -1.55
CD248Q9HCU0 OR4K7P-201ENST00000580232 945 ntBASIC5.36□□□□□ -1.55
CD248Q9HCU0 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.36□□□□□ -1.55
CD248Q9HCU0 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.36□□□□□ -1.55
CD248Q9HCU0 BNIP3P9-201ENST00000603714 553 ntBASIC5.36□□□□□ -1.55
CD248Q9HCU0 AC011374.2-201ENST00000607135 526 ntBASIC5.36□□□□□ -1.55
CD248Q9HCU0 AP000238.1-201ENST00000608759 426 ntBASIC5.36□□□□□ -1.55
CD248Q9HCU0 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD248Q9HCU0 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD248Q9HCU0 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD248Q9HCU0 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD248Q9HCU0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
CD248Q9HCU0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CD248Q9HCU0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD248Q9HCU0 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD248Q9HCU0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD248Q9HCU0 AL049555.1-201ENST00000562834 1933 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 AL079343.1-201ENST00000572358 1771 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 AP002001.2-201ENST00000529025 1469 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD248Q9HCU0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD248Q9HCU0 SNORA51.8-201ENST00000384234 132 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 Y_RNA.535-201ENST00000384612 99 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 RNU6-876P-201ENST00000391295 104 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 AL356057.2-201ENST00000403318 432 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 RN7SKP16-201ENST00000410180 299 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD248Q9HCU0 AC073069.1-201ENST00000428657 441 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 ATP5HP2-201ENST00000433885 485 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 AC092427.1-201ENST00000439177 601 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 AC002542.1-201ENST00000440683 193 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 AL157827.1-201ENST00000447622 132 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 OR6C5P-201ENST00000452388 923 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 AC098824.1-201ENST00000453565 980 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 MTCO3P11-201ENST00000455103 774 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 AC146507.1-201ENST00000468335 354 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 UBTFL6-201ENST00000477929 1024 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 AC004980.4-201ENST00000513375 203 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 AC022483.1-201ENST00000514020 567 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 CENPUP1-201ENST00000526649 1202 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD248Q9HCU0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 AC010680.3-201ENST00000604215 520 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 AC055876.5-201ENST00000605667 259 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 AC015914.2-201ENST00000618167 288 ntBASIC5.35□□□□□ -1.55
CD248Q9HCU0 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD248Q9HCU0 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD248Q9HCU0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD248Q9HCU0 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
CD248Q9HCU0 AC007390.2-201ENST00000606229 3803 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CD248Q9HCU0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD248Q9HCU0 VN2R3P-201ENST00000422626 1412 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 Y_RNA.9-201ENST00000362354 101 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 RNA5SP123-201ENST00000363244 119 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 SNORA56-201ENST00000383966 129 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 Y_RNA.450-201ENST00000384198 113 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 Y_RNA.453-201ENST00000384223 109 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 RN7SKP285-201ENST00000410137 318 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 RPL37P18-201ENST00000411602 243 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 GSTM3P2-201ENST00000412746 530 ntBASIC5.34□□□□□ -1.55
CD248Q9HCU0 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.34□□□□□ -1.55
CD248Q9HCU0 MTND5P14-201ENST00000441481 1267 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms