Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 NLRP3P1-201ENST00000622303 1785 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AC093311.1-201ENST00000506586 2021 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 MTND5P23-201ENST00000430812 1655 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 UGT2B26P-201ENST00000508672 1613 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 RNU6-462P-201ENST00000362659 105 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 Y_RNA.402-201ENST00000383972 102 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 RNU6-398P-201ENST00000384143 109 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 RNU6-1009P-201ENST00000390996 107 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 Z97832.1-201ENST00000402490 328 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AC009237.5-201ENST00000414271 501 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AL590139.1-201ENST00000416267 400 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AC114814.2-201ENST00000419195 485 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 COX6CP13-201ENST00000428703 226 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AL513175.1-201ENST00000431492 780 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 DPPA3P1-201ENST00000448050 469 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AC009220.1-201ENST00000451614 275 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 RN7SL738P-201ENST00000470264 297 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 MTND3P22-201ENST00000510932 243 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 RNU6-430P-201ENST00000517078 107 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 RNU6-1261P-201ENST00000517194 104 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AC138832.1-201ENST00000522871 556 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 OR5AL2P-201ENST00000532185 920 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AC063949.1-201ENST00000552900 865 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 EDDM3DP-201ENST00000554692 434 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 SNORD39.2-201ENST00000579995 76 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AC209154.1-201ENST00000582156 337 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AL049634.3-201ENST00000604968 457 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AL022394.1-201ENST00000606979 292 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AC064836.2-201ENST00000609491 462 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AL161616.1-201ENST00000611867 286 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AC010928.1-201ENST00000592477 1447 ntBASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
BCAS3Q9H6U6 AL121950.1-201ENST00000624993 2077 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 OR4K15-201ENST00000305051 1216 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 RNU6-723P-201ENST00000383973 107 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 MT-TD-201ENST00000387419 68 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 MTCO3P40-201ENST00000392516 676 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 EI24P3-201ENST00000399046 1062 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AL450992.3-201ENST00000413192 568 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 TBCAP2-201ENST00000416175 326 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 NUP35P2-201ENST00000416748 943 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AC245028.1-201ENST00000423259 256 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 FDX1P2-201ENST00000450769 375 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 RPL18AP17-201ENST00000455326 198 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 RPS26P24-201ENST00000497656 331 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 RPL7L1P13-201ENST00000511702 739 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms