Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NUP88Q99567 A2MP1-204ENST00000566278 4130 ntBASIC5.33□□□□□ -1.56
NUP88Q99567 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUP88Q99567 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.33□□□□□ -1.56
NUP88Q99567 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUP88Q99567 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUP88Q99567 AL450326.2-201ENST00000421913 1962 ntBASIC5.33□□□□□ -1.56
NUP88Q99567 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.33□□□□□ -1.56
NUP88Q99567 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NUP88Q99567 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP88Q99567 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP88Q99567 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP88Q99567 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP88Q99567 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP88Q99567 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP88Q99567 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 AL451142.2-201ENST00000429076 2090 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NUP88Q99567 AC011155.1-201ENST00000316512 456 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NUP88Q99567 SNORA70.2-201ENST00000364506 135 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP88Q99567 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP88Q99567 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP88Q99567 RPS12P10-201ENST00000427031 377 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 VDAC1P6-201ENST00000430062 855 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP88Q99567 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP88Q99567 B3GNT2P1-201ENST00000434960 952 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP88Q99567 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP88Q99567 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP88Q99567 MTCO3P16-201ENST00000454456 754 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP88Q99567 AC103987.1-201ENST00000473394 348 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 AC147055.4-201ENST00000504399 745 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP88Q99567 MTND1P22-201ENST00000510572 951 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP88Q99567 AC093840.1-201ENST00000511599 336 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP88Q99567 RN7SKP122-201ENST00000515923 296 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP88Q99567 MTCO1P49-201ENST00000523429 802 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP88Q99567 AC107918.3-201ENST00000533272 382 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP88Q99567 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP88Q99567 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP88Q99567 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP88Q99567 PARP1P2-201ENST00000556806 195 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP88Q99567 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP88Q99567 PIGPP4-201ENST00000584447 307 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP88Q99567 IMMP1LP1-201ENST00000605170 488 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP88Q99567 AP005019.3-201ENST00000620418 560 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 AC120349.2-201ENST00000625002 298 ntBASIC5.32□□□□□ -1.56
NUP88Q99567 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP88Q99567 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
NUP88Q99567 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP88Q99567 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP88Q99567 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP88Q99567 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP88Q99567 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
NUP88Q99567 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP88Q99567 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP88Q99567 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP88Q99567 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP88Q99567 SCN1A-220ENST00000641603 12506 ntBASIC5.31□□□□□ -1.56
NUP88Q99567 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP88Q99567 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP88Q99567 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP88Q99567 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
NUP88Q99567 DHX9P1-201ENST00000436565 3076 ntBASIC5.31□□□□□ -1.56
NUP88Q99567 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP88Q99567 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP88Q99567 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP88Q99567 OR4A15-201ENST00000314706 1035 ntBASIC5.31□□□□□ -1.56
NUP88Q99567 RNU6-251P-201ENST00000363235 104 ntBASIC5.31□□□□□ -1.56
NUP88Q99567 RNA5SP509-201ENST00000364577 119 ntBASIC5.31□□□□□ -1.56
NUP88Q99567 RNU6-657P-201ENST00000383904 107 ntBASIC5.31□□□□□ -1.56
NUP88Q99567 USP9YP33-201ENST00000412220 421 ntBASIC5.31□□□□□ -1.56
NUP88Q99567 TMSB10P2-201ENST00000416049 131 ntBASIC5.31□□□□□ -1.56
NUP88Q99567 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP88Q99567 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP88Q99567 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP88Q99567 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP88Q99567 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP88Q99567 USP9YP35-201ENST00000435696 412 ntBASIC5.31□□□□□ -1.56
NUP88Q99567 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP88Q99567 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NUP88Q99567 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP88Q99567 NPM1P33-201ENST00000438918 872 ntBASIC5.31□□□□□ -1.56
NUP88Q99567 AL445567.1-201ENST00000439121 144 ntBASIC5.31□□□□□ -1.56
NUP88Q99567 RPS26P2-201ENST00000440331 348 ntBASIC5.31□□□□□ -1.56
NUP88Q99567 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms