Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL512310.1-201ENST00000548639 172 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 AC127381.1-201ENST00000555979 939 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 AL845331.3-202ENST00000562856 261 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 RN7SL52P-201ENST00000584271 284 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 AC069304.2-201ENST00000605154 435 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 AC015712.7-201ENST00000615211 635 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 RN7SL722P-201ENST00000617780 284 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 RN7SL565P-201ENST00000618246 284 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 OR4F13P-202ENST00000560066 2054 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 Y_RNA.58-201ENST00000362807 102 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 RNU6-216P-201ENST00000363282 104 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 Y_RNA.126-201ENST00000363382 111 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 Y_RNA.154-201ENST00000363624 102 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 RNY3P1-201ENST00000365085 102 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 RNY3-201ENST00000365484 102 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 Y_RNA.490-201ENST00000384413 102 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 PIGFP2-201ENST00000421400 651 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 ARPC3P5-201ENST00000448802 534 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AC079448.1-201ENST00000449377 373 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AC239798.3-201ENST00000454459 408 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AC087312.1-201ENST00000471411 480 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AC015724.1-201ENST00000478577 156 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AL161747.1-201ENST00000480068 358 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AC083982.1-201ENST00000485679 344 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 RPS27P23-201ENST00000487608 251 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AC024940.3-201ENST00000538551 316 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AP005403.1-201ENST00000579720 229 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 MIR4307-201ENST00000582802 84 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AC011447.4-201ENST00000587562 111 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 RPL12P25-202ENST00000598100 674 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AC018809.2-201ENST00000602436 3823 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AL035413.2-201ENST00000604801 525 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AL136363.1-201ENST00000605349 337 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AL050343.2-201ENST00000607338 280 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 RNA5SP439-201ENST00000617595 124 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 AL645937.1-201ENST00000641739 1652 ntBASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNGAP1Q96PV0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 MTND5P23-201ENST00000430812 1655 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 RNU6-1227P-201ENST00000383981 107 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AL450338.1-201ENST00000407987 512 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 Y_RNA.608-201ENST00000410647 95 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC092634.6-201ENST00000418558 192 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC093162.1-201ENST00000419682 124 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 OR10T1P-201ENST00000424327 947 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC016712.1-201ENST00000431088 378 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AC009961.2-201ENST00000435771 251 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 RPL23AP16-201ENST00000441715 421 ntBASIC6.13□□□□□ -1.43
SYNGAP1Q96PV0 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms