Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AC020978.9-201ENST00000624380 1141 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 AC024560.2-201ENST00000507981 1497 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 OR4A15-201ENST00000314706 1035 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 RNU6-55P-201ENST00000411092 107 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 RNU6-954P-201ENST00000411355 107 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 TCEA1P4-201ENST00000415066 844 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 LIPT1P1-201ENST00000415870 1186 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 MTND2P15-201ENST00000418575 892 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 TXNP1-201ENST00000441872 371 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 CABYRP1-201ENST00000465493 1045 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 GAPDHP36-201ENST00000480688 918 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 OR9N1P-202ENST00000494289 481 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 TRAV31-201ENST00000502780 342 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 AC087272.1-201ENST00000523624 533 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 OR7E13P-201ENST00000526052 910 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 AP000926.4-201ENST00000527351 454 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 AC093014.1-201ENST00000548926 724 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 MIR5685-201ENST00000579080 79 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 MIR5047-201ENST00000579212 100 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 AP001180.3-201ENST00000582221 145 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 BNIP3P38-201ENST00000601117 544 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 AC135178.6-201ENST00000605314 398 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 AC099676.1-201ENST00000608886 657 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 MIR7153-201ENST00000637758 57 ntBASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RTN4IP1Q8WWV3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 RNA5SP515-201ENST00000364570 118 ntBASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 RPL32P23-201ENST00000397237 405 ntBASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 AL590704.1-201ENST00000402856 794 ntBASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 RN7SKP156-201ENST00000410308 342 ntBASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 RNU4-74P-201ENST00000411280 161 ntBASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 AC009237.5-201ENST00000414271 501 ntBASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 MTND4P11-201ENST00000417020 1058 ntBASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 NIPA2P1-201ENST00000426223 976 ntBASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 MTCYBP21-201ENST00000443300 1113 ntBASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 AC017099.1-201ENST00000448261 1028 ntBASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 HMGB1P26-201ENST00000452520 628 ntBASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 AC020893.1-201ENST00000502452 580 ntBASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 AC098799.1-201ENST00000504752 800 ntBASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 RNU2-27P-201ENST00000516185 142 ntBASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 PDCL2P2-201ENST00000533651 189 ntBASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 AC008011.1-201ENST00000545989 227 ntBASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 OR4U1P-201ENST00000554958 912 ntBASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.02□□□□□ -1.93
RTN4IP1Q8WWV3 HSPE1P5-201ENST00000561489 272 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms