Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SNED1Q8TER0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNED1Q8TER0 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SNED1Q8TER0 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNED1Q8TER0 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 MTCO2P8-201ENST00000412213 658 ntBASIC4.44□□□□□ -1.7
SNED1Q8TER0 ZNF885P-201ENST00000420174 1098 ntBASIC4.44□□□□□ -1.7
SNED1Q8TER0 AC073464.3-201ENST00000422564 712 ntBASIC4.44□□□□□ -1.7
SNED1Q8TER0 AJ239321.1-201ENST00000424255 564 ntBASIC4.44□□□□□ -1.7
SNED1Q8TER0 MTCO2P23-201ENST00000425216 680 ntBASIC4.44□□□□□ -1.7
SNED1Q8TER0 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 RPL23AP4-201ENST00000427757 463 ntBASIC4.44□□□□□ -1.7
SNED1Q8TER0 AC073508.1-201ENST00000428866 656 ntBASIC4.44□□□□□ -1.7
SNED1Q8TER0 MTND4LP14-201ENST00000429447 288 ntBASIC4.44□□□□□ -1.7
SNED1Q8TER0 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 AP001486.1-201ENST00000463339 476 ntBASIC4.44□□□□□ -1.7
SNED1Q8TER0 AC037198.2-201ENST00000478845 733 ntBASIC4.44□□□□□ -1.7
SNED1Q8TER0 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 RNU6-760P-201ENST00000516078 97 ntBASIC4.44□□□□□ -1.7
SNED1Q8TER0 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SNED1Q8TER0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 AC135279.1-201ENST00000543493 504 ntBASIC4.44□□□□□ -1.7
SNED1Q8TER0 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 MTCYBP28-201ENST00000566728 1132 ntBASIC4.44□□□□□ -1.7
SNED1Q8TER0 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 AC146944.4-201ENST00000602697 718 ntBASIC4.44□□□□□ -1.7
SNED1Q8TER0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 AC012213.4-201ENST00000606457 354 ntBASIC4.44□□□□□ -1.7
SNED1Q8TER0 AL121652.1-201ENST00000608851 448 ntBASIC4.44□□□□□ -1.7
SNED1Q8TER0 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SNED1Q8TER0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNED1Q8TER0 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.44□□□□□ -1.7
SNED1Q8TER0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.43□□□□□ -1.7
SNED1Q8TER0 IPO8P1-201ENST00000455509 3109 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.43□□□□□ -1.7
SNED1Q8TER0 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.43□□□□□ -1.7
SNED1Q8TER0 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNED1Q8TER0 RNU6-386P-201ENST00000362650 107 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 RNU6-178P-201ENST00000384631 104 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 NCSTNP1-201ENST00000406229 144 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 AL121882.1-201ENST00000422893 417 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.43□□□□□ -1.7
SNED1Q8TER0 ELOCP18-201ENST00000434209 337 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 AL392003.1-201ENST00000434394 243 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 AL512661.1-201ENST00000434586 1253 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 MTCO2P20-201ENST00000437339 673 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 MTND1P33-201ENST00000446251 917 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 Z75741.1-201ENST00000446793 314 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 AC006480.1-201ENST00000449887 378 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 SEPT7P6-201ENST00000469999 1143 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 RPL32P34-201ENST00000486380 400 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.43□□□□□ -1.7
SNED1Q8TER0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.43□□□□□ -1.7
SNED1Q8TER0 HIGD1AP18-201ENST00000520730 278 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.43□□□□□ -1.7
SNED1Q8TER0 AC023538.1-201ENST00000534576 736 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 NCAPGP2-201ENST00000557911 754 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 FAM60CP-201ENST00000591086 664 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.43□□□□□ -1.7
SNED1Q8TER0 MIMT1-201ENST00000597105 1050 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 AC125494.3-201ENST00000602759 455 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 AC008638.3-201ENST00000603341 463 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.43□□□□□ -1.7
SNED1Q8TER0 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.43□□□□□ -1.7
SNED1Q8TER0 AL157392.4-201ENST00000609756 345 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 AC117490.2-201ENST00000610042 594 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.43□□□□□ -1.7
SNED1Q8TER0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.43□□□□□ -1.7
SNED1Q8TER0 AC083843.2-201ENST00000568248 6253 ntBASIC4.43□□□□□ -1.7
SNED1Q8TER0 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNED1Q8TER0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.43□□□□□ -1.7
SNED1Q8TER0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SNED1Q8TER0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.43□□□□□ -1.7
SNED1Q8TER0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SNED1Q8TER0 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
SNED1Q8TER0 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNED1Q8TER0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNED1Q8TER0 AC118273.1-201ENST00000525324 3006 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 AL445523.1-201ENST00000451184 1362 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNED1Q8TER0 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SNED1Q8TER0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNED1Q8TER0 RNU4-44P-201ENST00000363050 141 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNED1Q8TER0 SNORA48.5-201ENST00000391143 135 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms