Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RPL7P25-201ENST00000404151 721 ntBASIC4.84□□□□□ -1.63
VPS8Q8N3P4 RN7SKP220-201ENST00000410611 288 ntBASIC4.84□□□□□ -1.63
VPS8Q8N3P4 VWA8P1-201ENST00000510889 176 ntBASIC4.84□□□□□ -1.63
VPS8Q8N3P4 AL121594.4-201ENST00000556211 1196 ntBASIC4.84□□□□□ -1.63
VPS8Q8N3P4 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS8Q8N3P4 AC008121.2-201ENST00000614647 523 ntBASIC4.84□□□□□ -1.63
VPS8Q8N3P4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS8Q8N3P4 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.84□□□□□ -1.63
VPS8Q8N3P4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS8Q8N3P4 MTND5P24-201ENST00000438892 1767 ntBASIC4.84□□□□□ -1.63
VPS8Q8N3P4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS8Q8N3P4 AL353692.2-201ENST00000407054 335 ntBASIC4.83□□□□□ -1.64
VPS8Q8N3P4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS8Q8N3P4 RPL23AP22-201ENST00000437556 453 ntBASIC4.83□□□□□ -1.64
VPS8Q8N3P4 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS8Q8N3P4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS8Q8N3P4 S100A11P2-201ENST00000467589 312 ntBASIC4.83□□□□□ -1.64
VPS8Q8N3P4 RNA5SP217-201ENST00000515959 91 ntBASIC4.83□□□□□ -1.64
VPS8Q8N3P4 RNU6-1231P-201ENST00000517185 103 ntBASIC4.83□□□□□ -1.64
VPS8Q8N3P4 AP000889.1-201ENST00000530968 660 ntBASIC4.83□□□□□ -1.64
VPS8Q8N3P4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS8Q8N3P4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS8Q8N3P4 CR392039.4-201ENST00000624968 501 ntBASIC4.83□□□□□ -1.64
VPS8Q8N3P4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS8Q8N3P4 TTC39DP-201ENST00000416781 1688 ntBASIC4.83□□□□□ -1.64
VPS8Q8N3P4 ELL2P4-201ENST00000446870 1376 ntBASIC4.83□□□□□ -1.64
VPS8Q8N3P4 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS8Q8N3P4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
VPS8Q8N3P4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS8Q8N3P4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VPS8Q8N3P4 MIR422A-201ENST00000362286 90 ntBASIC4.82□□□□□ -1.64
VPS8Q8N3P4 RNU1-140P-201ENST00000365040 165 ntBASIC4.82□□□□□ -1.64
VPS8Q8N3P4 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.82□□□□□ -1.64
VPS8Q8N3P4 RPL37P4-201ENST00000448908 268 ntBASIC4.82□□□□□ -1.64
VPS8Q8N3P4 PRDX3P4-201ENST00000470828 747 ntBASIC4.82□□□□□ -1.64
VPS8Q8N3P4 ST13P14-201ENST00000474095 734 ntBASIC4.82□□□□□ -1.64
VPS8Q8N3P4 AC068724.1-201ENST00000487100 792 ntBASIC4.82□□□□□ -1.64
VPS8Q8N3P4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS8Q8N3P4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS8Q8N3P4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS8Q8N3P4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS8Q8N3P4 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS8Q8N3P4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
VPS8Q8N3P4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS8Q8N3P4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS8Q8N3P4 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS8Q8N3P4 SNORA11C-201ENST00000408532 129 ntBASIC4.81□□□□□ -1.64
VPS8Q8N3P4 AC006960.1-201ENST00000419980 153 ntBASIC4.81□□□□□ -1.64
VPS8Q8N3P4 AC011242.1-201ENST00000433596 1158 ntBASIC4.81□□□□□ -1.64
VPS8Q8N3P4 RN7SL20P-201ENST00000488827 297 ntBASIC4.81□□□□□ -1.64
VPS8Q8N3P4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS8Q8N3P4 RNU1-103P-201ENST00000516502 125 ntBASIC4.81□□□□□ -1.64
VPS8Q8N3P4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS8Q8N3P4 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS8Q8N3P4 AC019080.5-201ENST00000624891 757 ntBASIC4.81□□□□□ -1.64
VPS8Q8N3P4 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS8Q8N3P4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS8Q8N3P4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS8Q8N3P4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS8Q8N3P4 AL049555.1-201ENST00000562834 1933 ntBASIC4.81□□□□□ -1.64
VPS8Q8N3P4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS8Q8N3P4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS8Q8N3P4 RPL31P12-201ENST00000422587 358 ntBASIC4.8□□□□□ -1.64
VPS8Q8N3P4 RPS12P5-201ENST00000423449 371 ntBASIC4.8□□□□□ -1.64
VPS8Q8N3P4 OR2AS1P-201ENST00000427827 319 ntBASIC4.8□□□□□ -1.64
VPS8Q8N3P4 HMGB1P5-202ENST00000451497 985 ntBASIC4.8□□□□□ -1.64
VPS8Q8N3P4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS8Q8N3P4 EIF4BP1-201ENST00000554881 351 ntBASIC4.8□□□□□ -1.64
VPS8Q8N3P4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS8Q8N3P4 AC025946.2-201ENST00000603398 234 ntBASIC4.8□□□□□ -1.64
VPS8Q8N3P4 AL033523.1-201ENST00000605153 153 ntBASIC4.8□□□□□ -1.64
VPS8Q8N3P4 OR5BR1P-201ENST00000524992 1330 ntBASIC4.8□□□□□ -1.64
VPS8Q8N3P4 AP003122.5-201ENST00000527668 3766 ntBASIC4.8□□□□□ -1.64
VPS8Q8N3P4 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS8Q8N3P4 AC012020.1-201ENST00000624541 1728 ntBASIC4.8□□□□□ -1.64
VPS8Q8N3P4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
VPS8Q8N3P4 SRP72P2-201ENST00000344851 1979 ntBASIC4.8□□□□□ -1.64
VPS8Q8N3P4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS8Q8N3P4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VPS8Q8N3P4 AC107027.3-201ENST00000565095 3473 ntBASIC4.8□□□□□ -1.64
VPS8Q8N3P4 MIR634-201ENST00000385208 97 ntBASIC4.8□□□□□ -1.64
VPS8Q8N3P4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS8Q8N3P4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS8Q8N3P4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS8Q8N3P4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS8Q8N3P4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS8Q8N3P4 RPL7P48-201ENST00000461513 746 ntBASIC4.8□□□□□ -1.64
VPS8Q8N3P4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS8Q8N3P4 AC093732.2-201ENST00000607950 274 ntBASIC4.8□□□□□ -1.64
VPS8Q8N3P4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS8Q8N3P4 HSPA8P17-201ENST00000427029 1382 ntBASIC4.8□□□□□ -1.64
VPS8Q8N3P4 PWAR6-201ENST00000552334 4618 ntBASIC4.8□□□□□ -1.64
VPS8Q8N3P4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
VPS8Q8N3P4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS8Q8N3P4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS8Q8N3P4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS8Q8N3P4 AL079305.1-201ENST00000623159 3008 ntBASIC4.79□□□□□ -1.64
VPS8Q8N3P4 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS8Q8N3P4 SNORD15B-201ENST00000384714 146 ntBASIC4.79□□□□□ -1.64
VPS8Q8N3P4 OR4K6P-201ENST00000416478 897 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms