Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 HMGB1P23-201ENST00000518743 568 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 NDUFB9P3-201ENST00000521269 501 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 COX6B1P6-201ENST00000522347 255 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 RNA5SP108-201ENST00000605921 117 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 MIR6748-201ENST00000610433 71 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AC090506.2-201ENST00000624521 419 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 AL163152.1-201ENST00000642001 374 ntBASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
NUDCD3Q8IVD9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 SNORA56-201ENST00000383966 129 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 RNU2-37P-201ENST00000410695 177 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 TATDN1P1-201ENST00000414123 891 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AL357078.2-201ENST00000416486 427 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AL356095.1-201ENST00000417217 199 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AL390879.2-203ENST00000426943 1121 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AC023347.2-201ENST00000433994 462 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 TXNP1-201ENST00000441872 371 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 SETD6P1-201ENST00000444575 317 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 SNRPGP3-201ENST00000469405 227 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AC022034.3-201ENST00000471393 478 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 NDUFA5P9-201ENST00000472609 340 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AC090071.1-201ENST00000507713 644 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 SNORA31.9-201ENST00000516429 84 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AC008562.1-201ENST00000521763 330 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AC120057.2-201ENST00000571520 271 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 KPNA2P3-201ENST00000584190 848 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 BNIP3P38-201ENST00000601117 544 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AL023583.1-201ENST00000607518 1143 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AP001033.2-201ENST00000609701 1003 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 MIR6867-201ENST00000610636 67 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AC008121.2-201ENST00000614647 523 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AC016717.3-201ENST00000624730 554 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AC083865.1-201ENST00000636634 831 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 AF127577.6-201ENST00000623352 2191 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 ASNSP1-204ENST00000641977 1664 ntBASIC3.62□□□□□ -1.83
NUDCD3Q8IVD9 USP8P1-201ENST00000494673 3183 ntBASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 U1.1-201ENST00000384101 164 ntBASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 SOD2P1-201ENST00000396543 562 ntBASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 RPL21P65-201ENST00000406094 466 ntBASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 RNU2-65P-201ENST00000410162 185 ntBASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 PNRC2P1-201ENST00000423940 420 ntBASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 AC005189.1-201ENST00000431286 310 ntBASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 PPIAP3-201ENST00000450588 505 ntBASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 RNU7-170P-201ENST00000459303 61 ntBASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 RPL23AP14-201ENST00000468281 468 ntBASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 AL049830.2-201ENST00000480072 201 ntBASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 SETP12-201ENST00000514068 805 ntBASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 RN7SKP234-201ENST00000517173 224 ntBASIC3.61□□□□□ -1.83
NUDCD3Q8IVD9 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms