Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.23□□□□□ -1.73
CDH12P55289 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.23□□□□□ -1.73
CDH12P55289 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH12P55289 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH12P55289 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH12P55289 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH12P55289 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH12P55289 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH12P55289 AC090017.1-201ENST00000548612 1779 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AL390237.1-201ENST00000404226 1415 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AC073429.2-201ENST00000569694 1444 ntBASIC4.22□□□□□ -1.73
CDH12P55289 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDH12P55289 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH12P55289 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH12P55289 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CDH12P55289 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH12P55289 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDH12P55289 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH12P55289 RNU1-63P-201ENST00000383902 164 ntBASIC4.22□□□□□ -1.73
CDH12P55289 RNU1-44P-201ENST00000384453 163 ntBASIC4.22□□□□□ -1.73
CDH12P55289 SNORD116-4-201ENST00000384733 96 ntBASIC4.22□□□□□ -1.73
CDH12P55289 MT-TH-201ENST00000387441 69 ntBASIC4.22□□□□□ -1.73
CDH12P55289 RN7SKP267-201ENST00000410381 285 ntBASIC4.22□□□□□ -1.73
CDH12P55289 RNU2-50P-201ENST00000410494 143 ntBASIC4.22□□□□□ -1.73
CDH12P55289 RN7SKP216-201ENST00000411050 312 ntBASIC4.22□□□□□ -1.73
CDH12P55289 CYCSP10-201ENST00000417973 294 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AC008280.1-201ENST00000418851 412 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AC140479.3-201ENST00000418944 1126 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AC062016.2-201ENST00000420950 676 ntBASIC4.22□□□□□ -1.73
CDH12P55289 MTCO3P5-201ENST00000433620 714 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AL627308.1-201ENST00000435693 821 ntBASIC4.22□□□□□ -1.73
CDH12P55289 SLC31A1P1-201ENST00000451221 567 ntBASIC4.22□□□□□ -1.73
CDH12P55289 ISCUP1-201ENST00000454451 448 ntBASIC4.22□□□□□ -1.73
CDH12P55289 RPL18AP17-201ENST00000455326 198 ntBASIC4.22□□□□□ -1.73
CDH12P55289 MTCO2P18-201ENST00000457151 658 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AC063943.1-201ENST00000465434 453 ntBASIC4.22□□□□□ -1.73
CDH12P55289 RPS26P28-201ENST00000470806 348 ntBASIC4.22□□□□□ -1.73
CDH12P55289 RN7SL177P-201ENST00000476596 299 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AC004453.1-201ENST00000487895 408 ntBASIC4.22□□□□□ -1.73
CDH12P55289 OR5M14P-201ENST00000506803 618 ntBASIC4.22□□□□□ -1.73
CDH12P55289 RN7SKP276-201ENST00000516242 268 ntBASIC4.22□□□□□ -1.73
CDH12P55289 SCARNA21.2-201ENST00000516600 166 ntBASIC4.22□□□□□ -1.73
CDH12P55289 RN7SKP96-201ENST00000516948 297 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AC008694.2-201ENST00000517591 306 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH12P55289 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH12P55289 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.22□□□□□ -1.73
CDH12P55289 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH12P55289 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDH12P55289 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH12P55289 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH12P55289 AC023161.2-201ENST00000551218 780 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH12P55289 AC024909.2-201ENST00000553035 286 ntBASIC4.22□□□□□ -1.73
CDH12P55289 EDDM3DP-201ENST00000554692 434 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH12P55289 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH12P55289 AC105129.1-201ENST00000560250 297 ntBASIC4.22□□□□□ -1.73
CDH12P55289 MTND6P33-201ENST00000571794 183 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AL121834.1-201ENST00000572284 509 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH12P55289 OR7E18P-201ENST00000592589 702 ntBASIC4.22□□□□□ -1.73
CDH12P55289 SDR42E1P1-201ENST00000611327 477 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AL138721.1-201ENST00000616756 179 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AC068870.2-201ENST00000620635 389 ntBASIC4.22□□□□□ -1.73
CDH12P55289 MIR7154-201ENST00000620673 73 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AC098679.4-201ENST00000624241 654 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH12P55289 AC025125.1-201ENST00000624743 1922 ntBASIC4.22□□□□□ -1.73
CDH12P55289 AP000756.2-201ENST00000624168 2567 ntBASIC4.22□□□□□ -1.73
CDH12P55289 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH12P55289 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH12P55289 AC091046.3-201ENST00000631455 1574 ntBASIC4.22□□□□□ -1.73
CDH12P55289 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH12P55289 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH12P55289 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CDH12P55289 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CDH12P55289 AC093535.2-201ENST00000624769 2326 ntBASIC4.21□□□□□ -1.74
CDH12P55289 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDH12P55289 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDH12P55289 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CDH12P55289 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH12P55289 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH12P55289 AC067945.1-201ENST00000342609 618 ntBASIC4.21□□□□□ -1.74
CDH12P55289 RNU1-108P-201ENST00000362556 161 ntBASIC4.21□□□□□ -1.74
CDH12P55289 RNA5SP22-201ENST00000365393 109 ntBASIC4.21□□□□□ -1.74
CDH12P55289 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH12P55289 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
CDH12P55289 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDH12P55289 RNU6-657P-201ENST00000383904 107 ntBASIC4.21□□□□□ -1.74
CDH12P55289 RNU6-444P-201ENST00000383988 108 ntBASIC4.21□□□□□ -1.74
CDH12P55289 SNORA26.8-201ENST00000391306 124 ntBASIC4.21□□□□□ -1.74
CDH12P55289 AL121978.1-201ENST00000402778 359 ntBASIC4.21□□□□□ -1.74
CDH12P55289 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH12P55289 RNU6-603P-201ENST00000411403 107 ntBASIC4.21□□□□□ -1.74
CDH12P55289 USP9YP33-201ENST00000412220 421 ntBASIC4.21□□□□□ -1.74
CDH12P55289 EIF4EP1-201ENST00000422311 642 ntBASIC4.21□□□□□ -1.74
CDH12P55289 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH12P55289 USP9YP35-201ENST00000435696 412 ntBASIC4.21□□□□□ -1.74
CDH12P55289 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms