Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 USP9YP1-201ENST00000513521 1002 ntBASIC3.34□□□□□ -1.87
BRCA2P51587 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
BRCA2P51587 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
BRCA2P51587 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.34□□□□□ -1.87
BRCA2P51587 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.34□□□□□ -1.87
BRCA2P51587 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.34□□□□□ -1.88
BRCA2P51587 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.34□□□□□ -1.88
BRCA2P51587 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
BRCA2P51587 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
BRCA2P51587 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
BRCA2P51587 Y_RNA.118-201ENST00000363300 101 ntBASIC3.34□□□□□ -1.88
BRCA2P51587 Y_RNA.508-201ENST00000384502 114 ntBASIC3.34□□□□□ -1.88
BRCA2P51587 SNORD15B-201ENST00000384714 146 ntBASIC3.34□□□□□ -1.88
BRCA2P51587 MIR196B-201ENST00000384852 84 ntBASIC3.34□□□□□ -1.88
BRCA2P51587 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
BRCA2P51587 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.34□□□□□ -1.88
BRCA2P51587 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.34□□□□□ -1.88
BRCA2P51587 AL590103.1-201ENST00000434488 307 ntBASIC3.34□□□□□ -1.88
BRCA2P51587 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.34□□□□□ -1.88
BRCA2P51587 ANP32BP2-201ENST00000454525 545 ntBASIC3.34□□□□□ -1.88
BRCA2P51587 RPS27AP9-201ENST00000477681 438 ntBASIC3.34□□□□□ -1.88
BRCA2P51587 AC083906.5-201ENST00000503722 328 ntBASIC3.34□□□□□ -1.88
BRCA2P51587 AC008565.1-201ENST00000509046 885 ntBASIC3.34□□□□□ -1.88
BRCA2P51587 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.34□□□□□ -1.88
BRCA2P51587 AC099489.2-201ENST00000574976 260 ntBASIC3.34□□□□□ -1.88
BRCA2P51587 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.34□□□□□ -1.88
BRCA2P51587 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.34□□□□□ -1.88
BRCA2P51587 AL392112.1-201ENST00000605115 829 ntBASIC3.34□□□□□ -1.88
BRCA2P51587 AC099506.2-201ENST00000623074 221 ntBASIC3.34□□□□□ -1.88
BRCA2P51587 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BRCA2P51587 MIR7-2-201ENST00000384970 110 ntBASIC3.33□□□□□ -1.88
BRCA2P51587 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.33□□□□□ -1.88
BRCA2P51587 AP003122.3-201ENST00000526316 255 ntBASIC3.33□□□□□ -1.88
BRCA2P51587 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.33□□□□□ -1.88
BRCA2P51587 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
BRCA2P51587 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.33□□□□□ -1.88
BRCA2P51587 DMD-205ENST00000359836 7339 ntTSL 5 BASIC3.33□□□□□ -1.88
BRCA2P51587 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BRCA2P51587 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.33□□□□□ -1.88
BRCA2P51587 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
BRCA2P51587 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
BRCA2P51587 RNA5SP52-201ENST00000362448 134 ntBASIC3.33□□□□□ -1.88
BRCA2P51587 RNU2-52P-201ENST00000410680 190 ntBASIC3.33□□□□□ -1.88
BRCA2P51587 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.33□□□□□ -1.88
BRCA2P51587 CST9LP2-201ENST00000437612 320 ntBASIC3.33□□□□□ -1.88
BRCA2P51587 RPS4XP22-201ENST00000480755 780 ntBASIC3.33□□□□□ -1.88
BRCA2P51587 BTG4P1-201ENST00000510421 183 ntBASIC3.33□□□□□ -1.88
BRCA2P51587 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.33□□□□□ -1.88
BRCA2P51587 AC025811.1-201ENST00000604312 472 ntBASIC3.33□□□□□ -1.88
BRCA2P51587 AC026790.2-201ENST00000606282 430 ntBASIC3.33□□□□□ -1.88
BRCA2P51587 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BRCA2P51587 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BRCA2P51587 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BRCA2P51587 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.32□□□□□ -1.88
BRCA2P51587 AC092447.2-201ENST00000435487 669 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 PRDX3P4-201ENST00000470828 747 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 RPL31P13-201ENST00000484151 370 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 IGKV2-36-201ENST00000519999 223 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.32□□□□□ -1.88
BRCA2P51587 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.32□□□□□ -1.88
BRCA2P51587 AL356321.1-201ENST00000621360 228 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
BRCA2P51587 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.32□□□□□ -1.88
BRCA2P51587 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.32□□□□□ -1.88
BRCA2P51587 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BRCA2P51587 SEPT7P6-201ENST00000469999 1143 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 RPS3AP50-201ENST00000487064 803 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 CKS1BP2-201ENST00000497342 240 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 RNU1-143P-201ENST00000516296 146 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.32□□□□□ -1.88
BRCA2P51587 U1.23-201ENST00000610293 146 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 RNU1-68P-201ENST00000615382 146 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 U1.39-201ENST00000621562 146 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.32□□□□□ -1.88
BRCA2P51587 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
BRCA2P51587 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
BRCA2P51587 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BRCA2P51587 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BRCA2P51587 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BRCA2P51587 AC011266.1-201ENST00000624119 3569 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC3.32□□□□□ -1.88
BRCA2P51587 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.32□□□□□ -1.88
BRCA2P51587 AL445528.1-201ENST00000426330 420 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.32□□□□□ -1.88
BRCA2P51587 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.32□□□□□ -1.88
BRCA2P51587 SNRPGP5-201ENST00000456003 220 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 RFPL4AP3-201ENST00000515267 345 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 DDX18P4-201ENST00000511690 1966 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 MTND5P24-201ENST00000438892 1767 ntBASIC3.32□□□□□ -1.88
BRCA2P51587 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.31□□□□□ -1.88
BRCA2P51587 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
BRCA2P51587 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
BRCA2P51587 RNU6-283P-201ENST00000364788 107 ntBASIC3.31□□□□□ -1.88
BRCA2P51587 AC114967.1-201ENST00000504890 259 ntBASIC3.31□□□□□ -1.88
BRCA2P51587 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC3.31□□□□□ -1.88
BRCA2P51587 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.31□□□□□ -1.88
BRCA2P51587 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
BRCA2P51587 AC134882.1-201ENST00000603738 1676 ntBASIC3.31□□□□□ -1.88
BRCA2P51587 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
BRCA2P51587 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms