Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXA11P31270 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA11P31270 MAPK10-349ENST00000641767 3661 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
HOXA11P31270 MAPK10-303ENST00000641324 3959 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXA11P31270 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
HOXA11P31270 RN7SKP280-201ENST00000364196 304 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 RNU4-24P-201ENST00000364565 139 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 RNA5SP22-201ENST00000365393 109 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.67
HOXA11P31270 SNORD65C-201ENST00000390962 71 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 MCTS2P-201ENST00000394552 546 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.6□□□□□ -1.67
HOXA11P31270 ERHP2-201ENST00000402323 299 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 PPIAP31-201ENST00000405422 495 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 RAP1BP1-201ENST00000412709 553 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA11P31270 Z75741.2-201ENST00000417272 1167 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA11P31270 AL365203.2-201ENST00000423444 196 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXA11P31270 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXA11P31270 MTCO3P30-201ENST00000426425 670 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXA11P31270 AL035458.1-201ENST00000433096 585 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 AL445567.1-201ENST00000439121 144 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 MTCO2P7-201ENST00000446518 666 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 ABCF2P2-201ENST00000450549 296 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA11P31270 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
HOXA11P31270 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA11P31270 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXA11P31270 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA11P31270 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HOXA11P31270 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.6□□□□□ -1.67
HOXA11P31270 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXA11P31270 AC105233.3-201ENST00000531125 744 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.6□□□□□ -1.67
HOXA11P31270 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA11P31270 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA11P31270 AC006518.2-201ENST00000542513 940 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 OR8R1P-201ENST00000543943 764 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA11P31270 AL161713.1-201ENST00000555538 145 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXA11P31270 AC135628.1-201ENST00000568867 534 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXA11P31270 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXA11P31270 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.6□□□□□ -1.67
HOXA11P31270 AC115085.1-201ENST00000588924 229 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXA11P31270 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXA11P31270 AC115621.1-201ENST00000604653 858 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 AC080013.3-201ENST00000606839 578 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXA11P31270 AC013562.2-201ENST00000611632 603 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA11P31270 AC010608.2-201ENST00000624830 470 ntBASIC4.6□□□□□ -1.67
HOXA11P31270 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA11P31270 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA11P31270 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA11P31270 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA11P31270 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA11P31270 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA11P31270 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA11P31270 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA11P31270 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA11P31270 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA11P31270 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA11P31270 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HOXA11P31270 AP000542.2-201ENST00000623199 6179 ntBASIC4.59□□□□□ -1.67
HOXA11P31270 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXA11P31270 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
HOXA11P31270 RNA5SP283-201ENST00000365604 119 ntBASIC4.59□□□□□ -1.67
HOXA11P31270 Y_RNA.578-201ENST00000390903 88 ntBASIC4.59□□□□□ -1.67
HOXA11P31270 GSTA8P-201ENST00000404253 637 ntBASIC4.59□□□□□ -1.67
HOXA11P31270 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXA11P31270 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HOXA11P31270 LINC01347-201ENST00000417964 355 ntBASIC4.59□□□□□ -1.67
HOXA11P31270 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXA11P31270 AL031736.2-201ENST00000426573 787 ntBASIC4.59□□□□□ -1.67
HOXA11P31270 KCTD10P1-201ENST00000434203 625 ntBASIC4.59□□□□□ -1.67
HOXA11P31270 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXA11P31270 ARL4AP3-201ENST00000441452 574 ntBASIC4.59□□□□□ -1.67
HOXA11P31270 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HOXA11P31270 PTENP1-201ENST00000447117 1215 ntBASIC4.59□□□□□ -1.67
HOXA11P31270 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXA11P31270 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXA11P31270 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HOXA11P31270 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXA11P31270 AC091951.3-201ENST00000504093 246 ntBASIC4.59□□□□□ -1.67
HOXA11P31270 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.59□□□□□ -1.67
HOXA11P31270 GTF2H2B-203ENST00000508065 1432 ntBASIC4.59□□□□□ -1.67
HOXA11P31270 AC093824.1-201ENST00000508796 343 ntBASIC4.59□□□□□ -1.67
HOXA11P31270 AC008565.1-201ENST00000509046 885 ntBASIC4.59□□□□□ -1.67
HOXA11P31270 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.59□□□□□ -1.67
HOXA11P31270 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXA11P31270 AP002812.4-201ENST00000532139 286 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms