Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 SEC11B-201ENST00000518383 499 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXA9P31269 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXA9P31269 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA9P31269 NCAPGP2-201ENST00000557911 754 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 AGGF1P8-201ENST00000562979 1000 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXA9P31269 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXA9P31269 AC006077.1-201ENST00000604746 343 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 AC012213.4-201ENST00000606457 354 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA9P31269 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA9P31269 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
HOXA9P31269 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA9P31269 AC087565.3-202ENST00000642085 1603 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA9P31269 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA9P31269 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXA9P31269 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HOXA9P31269 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXA9P31269 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA9P31269 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA9P31269 MAPK10-373ENST00000641983 6772 ntBASIC3.79□□□□□ -1.8
HOXA9P31269 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HOXA9P31269 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HOXA9P31269 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXA9P31269 AL356806.1-201ENST00000422524 916 ntBASIC3.79□□□□□ -1.8
HOXA9P31269 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA9P31269 HMGN2P7-201ENST00000456186 273 ntBASIC3.79□□□□□ -1.8
HOXA9P31269 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA9P31269 SETP14-201ENST00000497538 873 ntBASIC3.79□□□□□ -1.8
HOXA9P31269 BTF3L4P4-201ENST00000506381 449 ntBASIC3.79□□□□□ -1.8
HOXA9P31269 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA9P31269 Vault.1-201ENST00000516474 102 ntBASIC3.79□□□□□ -1.8
HOXA9P31269 AC026616.1-201ENST00000523157 525 ntBASIC3.79□□□□□ -1.8
HOXA9P31269 AC093014.1-201ENST00000548926 724 ntBASIC3.79□□□□□ -1.8
HOXA9P31269 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA9P31269 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA9P31269 AC037471.2-201ENST00000564941 598 ntBASIC3.79□□□□□ -1.8
HOXA9P31269 AP001180.3-201ENST00000582221 145 ntBASIC3.79□□□□□ -1.8
HOXA9P31269 BNIP3P19-201ENST00000605397 577 ntBASIC3.79□□□□□ -1.8
HOXA9P31269 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA9P31269 AL118556.2-201ENST00000614375 824 ntBASIC3.79□□□□□ -1.8
HOXA9P31269 uc_338.9-201ENST00000617424 182 ntBASIC3.79□□□□□ -1.8
HOXA9P31269 AC139769.3-201ENST00000618383 175 ntBASIC3.79□□□□□ -1.8
HOXA9P31269 AL732618.1-201ENST00000623251 301 ntBASIC3.79□□□□□ -1.8
HOXA9P31269 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXA9P31269 MIR3651-201ENST00000630427 90 ntBASIC3.79□□□□□ -1.8
HOXA9P31269 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXA9P31269 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXA9P31269 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.79□□□□□ -1.8
HOXA9P31269 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA9P31269 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA9P31269 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXA9P31269 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA9P31269 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA9P31269 AL356274.2-201ENST00000624379 3752 ntBASIC3.78□□□□□ -1.8
HOXA9P31269 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA9P31269 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HOXA9P31269 RN7SKP111-201ENST00000410349 271 ntBASIC3.78□□□□□ -1.8
HOXA9P31269 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXA9P31269 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXA9P31269 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXA9P31269 MTCO1P45-201ENST00000431457 267 ntBASIC3.78□□□□□ -1.8
HOXA9P31269 TRIM60P13-201ENST00000432350 1283 ntBASIC3.78□□□□□ -1.8
HOXA9P31269 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXA9P31269 MTND2P3-201ENST00000452458 470 ntBASIC3.78□□□□□ -1.8
HOXA9P31269 TVP23BP2-201ENST00000455082 615 ntBASIC3.78□□□□□ -1.8
HOXA9P31269 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA9P31269 AC010342.1-201ENST00000514047 877 ntBASIC3.78□□□□□ -1.8
HOXA9P31269 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXA9P31269 MIR2114-201ENST00000516645 80 ntBASIC3.78□□□□□ -1.8
HOXA9P31269 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXA9P31269 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA9P31269 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA9P31269 AC141257.3-201ENST00000572906 215 ntBASIC3.78□□□□□ -1.8
HOXA9P31269 MIR5186-201ENST00000577504 120 ntBASIC3.78□□□□□ -1.8
HOXA9P31269 AC067852.4-201ENST00000590314 478 ntBASIC3.78□□□□□ -1.8
HOXA9P31269 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.78□□□□□ -1.8
HOXA9P31269 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXA9P31269 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.78□□□□□ -1.8
HOXA9P31269 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXA9P31269 OR5AC4P-202ENST00000642086 985 ntBASIC3.78□□□□□ -1.8
HOXA9P31269 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA9P31269 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA9P31269 USP8P1-201ENST00000494673 3183 ntBASIC3.77□□□□□ -1.81
HOXA9P31269 AC096656.1-201ENST00000623826 1364 ntBASIC3.77□□□□□ -1.81
HOXA9P31269 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA9P31269 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HOXA9P31269 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA9P31269 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA9P31269 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA9P31269 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA9P31269 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA9P31269 MTND3P20-201ENST00000407663 186 ntBASIC3.77□□□□□ -1.81
HOXA9P31269 MTHFD2P2-201ENST00000407725 247 ntBASIC3.77□□□□□ -1.81
HOXA9P31269 RN7SKP56-201ENST00000410513 331 ntBASIC3.77□□□□□ -1.81
HOXA9P31269 BX842559.1-201ENST00000419615 532 ntBASIC3.77□□□□□ -1.81
HOXA9P31269 AC005326.1-201ENST00000429197 123 ntBASIC3.77□□□□□ -1.81
HOXA9P31269 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms