Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 OR10R1P-201ENST00000441524 1141 ntBASIC4.14□□□□□ -1.75
CDH3P22223 MTND1P33-201ENST00000446251 917 ntBASIC4.14□□□□□ -1.75
CDH3P22223 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CDH3P22223 MRPL35P4-201ENST00000453682 566 ntBASIC4.14□□□□□ -1.75
CDH3P22223 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH3P22223 AC103987.1-201ENST00000473394 348 ntBASIC4.14□□□□□ -1.75
CDH3P22223 AC091959.2-201ENST00000477363 321 ntBASIC4.14□□□□□ -1.75
CDH3P22223 RPL21P103-201ENST00000479921 488 ntBASIC4.14□□□□□ -1.75
CDH3P22223 AC073522.1-201ENST00000483312 377 ntBASIC4.14□□□□□ -1.75
CDH3P22223 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.14□□□□□ -1.75
CDH3P22223 KCTD9P2-201ENST00000512203 1013 ntBASIC4.14□□□□□ -1.75
CDH3P22223 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH3P22223 RNA5SP49-201ENST00000516450 115 ntBASIC4.14□□□□□ -1.75
CDH3P22223 RNA5SP519-201ENST00000516480 119 ntBASIC4.14□□□□□ -1.75
CDH3P22223 RN7SKP283-201ENST00000517197 270 ntBASIC4.14□□□□□ -1.75
CDH3P22223 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.14□□□□□ -1.75
CDH3P22223 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH3P22223 AP003730.1-201ENST00000524605 285 ntBASIC4.14□□□□□ -1.75
CDH3P22223 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH3P22223 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH3P22223 MTCYBP23-201ENST00000558717 1102 ntBASIC4.14□□□□□ -1.75
CDH3P22223 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH3P22223 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.14□□□□□ -1.75
CDH3P22223 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.14□□□□□ -1.75
CDH3P22223 AC110741.2-201ENST00000605278 268 ntBASIC4.14□□□□□ -1.75
CDH3P22223 RNU4-5P-201ENST00000607255 135 ntBASIC4.14□□□□□ -1.75
CDH3P22223 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH3P22223 PART1_2.1-201ENST00000612397 250 ntBASIC4.14□□□□□ -1.75
CDH3P22223 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH3P22223 CDRT1-208ENST00000630868 794 ntBASIC4.14□□□□□ -1.75
CDH3P22223 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.14□□□□□ -1.75
CDH3P22223 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CDH3P22223 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.14□□□□□ -1.75
CDH3P22223 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CDH3P22223 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH3P22223 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH3P22223 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
CDH3P22223 AC092162.3-201ENST00000624511 1624 ntBASIC4.13□□□□□ -1.75
CDH3P22223 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH3P22223 AC119744.1-201ENST00000454746 1715 ntBASIC4.13□□□□□ -1.75
CDH3P22223 AC026951.1-201ENST00000559530 2459 ntBASIC4.13□□□□□ -1.75
CDH3P22223 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CDH3P22223 RNU1-14P-201ENST00000362759 152 ntBASIC4.13□□□□□ -1.75
CDH3P22223 RNA5SP322-201ENST00000363617 119 ntBASIC4.13□□□□□ -1.75
CDH3P22223 FABP12P1-201ENST00000401911 322 ntBASIC4.13□□□□□ -1.75
CDH3P22223 MIR1911-201ENST00000410783 80 ntBASIC4.13□□□□□ -1.75
CDH3P22223 MTND4P3-201ENST00000417829 541 ntBASIC4.13□□□□□ -1.75
CDH3P22223 UBTFL3-201ENST00000418934 1024 ntBASIC4.13□□□□□ -1.75
CDH3P22223 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH3P22223 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH3P22223 AL157831.1-201ENST00000426134 473 ntBASIC4.13□□□□□ -1.75
CDH3P22223 RPEP2-201ENST00000432149 701 ntBASIC4.13□□□□□ -1.75
CDH3P22223 UBE2V1P5-201ENST00000440070 405 ntBASIC4.13□□□□□ -1.75
CDH3P22223 BX248409.1-201ENST00000455497 255 ntBASIC4.13□□□□□ -1.75
CDH3P22223 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CDH3P22223 PRDX3P4-201ENST00000470828 747 ntBASIC4.13□□□□□ -1.75
CDH3P22223 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.13□□□□□ -1.75
CDH3P22223 UBTFL6-201ENST00000477929 1024 ntBASIC4.13□□□□□ -1.75
CDH3P22223 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CDH3P22223 AC106872.2-201ENST00000494303 480 ntBASIC4.13□□□□□ -1.75
CDH3P22223 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH3P22223 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.13□□□□□ -1.75
CDH3P22223 AC008494.2-201ENST00000514544 370 ntBASIC4.13□□□□□ -1.75
CDH3P22223 MTCO1P35-201ENST00000515270 228 ntBASIC4.13□□□□□ -1.75
CDH3P22223 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.13□□□□□ -1.75
CDH3P22223 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH3P22223 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH3P22223 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH3P22223 RPL23AP97-201ENST00000568955 471 ntBASIC4.13□□□□□ -1.75
CDH3P22223 AC141257.3-201ENST00000572906 215 ntBASIC4.13□□□□□ -1.75
CDH3P22223 AC090312.2-201ENST00000582687 378 ntBASIC4.13□□□□□ -1.75
CDH3P22223 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
CDH3P22223 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH3P22223 LLPHP1-201ENST00000603571 367 ntBASIC4.13□□□□□ -1.75
CDH3P22223 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH3P22223 AC018926.3-201ENST00000618841 406 ntBASIC4.13□□□□□ -1.75
CDH3P22223 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDH3P22223 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.13□□□□□ -1.75
CDH3P22223 AP001486.2-201ENST00000561652 5113 ntBASIC4.13□□□□□ -1.75
CDH3P22223 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CDH3P22223 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CDH3P22223 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH3P22223 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH3P22223 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDH3P22223 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH3P22223 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
CDH3P22223 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH3P22223 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
CDH3P22223 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH3P22223 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH3P22223 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH3P22223 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH3P22223 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH3P22223 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH3P22223 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CDH3P22223 AL121657.1-201ENST00000327215 531 ntBASIC4.12□□□□□ -1.75
CDH3P22223 ANKRD36P1-201ENST00000344424 659 ntBASIC4.12□□□□□ -1.75
CDH3P22223 RNA5SP167-201ENST00000365461 116 ntBASIC4.12□□□□□ -1.75
CDH3P22223 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH3P22223 RNU1-89P-201ENST00000384592 164 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms