| MUC1 | P15941 | SUMO1P1-201 | ENST00000497904 | 306 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | RNU6-1308P-201 | ENST00000516817 | 103 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC104393.1-201 | ENST00000517495 | 255 nt | TSL 3 BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | HIGD1AP18-201 | ENST00000520730 | 278 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | NDUFB9P3-201 | ENST00000521269 | 501 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC099520.1-205 | ENST00000524083 | 316 nt | TSL 3 BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AP000442.2-202 | ENST00000531311 | 601 nt | TSL 3 BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AL139174.1-201 | ENST00000531489 | 886 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | SOX9-AS1-214 | ENST00000540802 | 578 nt | TSL 4 BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AL121766.1-201 | ENST00000547436 | 487 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC006960.3-201 | ENST00000561845 | 705 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC004147.3-201 | ENST00000577709 | 375 nt | TSL 3 BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | MIR5187-201 | ENST00000583479 | 76 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC107982.3-201 | ENST00000584957 | 985 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC005242.1-201 | ENST00000585658 | 438 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC092474.3-201 | ENST00000603022 | 568 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AL163642.2-201 | ENST00000604722 | 1019 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | SNORA51-201 | ENST00000606420 | 132 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AL138686.1-201 | ENST00000612699 | 315 nt | TSL 3 BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | ZNF630-AS1-201 | ENST00000614448 | 397 nt | TSL 3 BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC099669.2-201 | ENST00000616549 | 437 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | PACRG-211 | ENST00000621363 | 360 nt | TSL 5 BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AP006248.3-201 | ENST00000623580 | 594 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AMY2A-201 | ENST00000414303 | 1634 nt | APPRIS P1 TSL 1 (best) BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | RNFT1-201 | ENST00000305783 | 2101 nt | APPRIS P1 TSL 1 (best) BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | PTER-201 | ENST00000298942 | 3448 nt | TSL 5 BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC007496.3-201 | ENST00000624987 | 3443 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | RGS21-201 | ENST00000417209 | 1794 nt | APPRIS P1 TSL 1 (best) BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | RTKN2-201 | ENST00000315289 | 2383 nt | TSL 2 BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AL359715.4-201 | ENST00000606629 | 1436 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | EED-203 | ENST00000351625 | 1696 nt | TSL 1 (best) BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | ATM-203 | ENST00000452508 | 12954 nt | APPRIS P1 TSL 1 (best) BASIC | 3.17 | □□□□□ -1.9 | | |
| MUC1 | P15941 | LINC01416-201 | ENST00000563553 | 2310 nt | TSL 1 (best) BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | FAM71D-211 | ENST00000612183 | 1790 nt | APPRIS P1 TSL 2 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | GLCE-202 | ENST00000559420 | 4840 nt | TSL 1 (best) BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | OR8K1-201 | ENST00000279783 | 1087 nt | APPRIS P1 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | OR8D1-201 | ENST00000357821 | 1026 nt | APPRIS P1 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | MT-ND3-201 | ENST00000361227 | 346 nt | APPRIS P1 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | RNU1-64P-201 | ENST00000365443 | 163 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | PTPRC-202 | ENST00000367364 | 1017 nt | TSL 1 (best) BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AL034374.1-201 | ENST00000406329 | 351 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC017079.2-201 | ENST00000416102 | 485 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | MTND2P15-201 | ENST00000418575 | 892 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | RPS12P23-201 | ENST00000419579 | 400 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC002454.1-204 | ENST00000419668 | 527 nt | TSL 3 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | MORF4L1P7-201 | ENST00000426038 | 703 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC022022.1-201 | ENST00000430304 | 178 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | LPP-AS1-201 | ENST00000434996 | 494 nt | TSL 3 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | MLIP-IT1-201 | ENST00000441845 | 643 nt | TSL 2 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | PTGES3P5-201 | ENST00000455109 | 434 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AP000873.1-201 | ENST00000463987 | 400 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | CABYRP1-201 | ENST00000465493 | 1045 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC108729.2-201 | ENST00000476543 | 840 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC091959.2-201 | ENST00000477363 | 321 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | LINC02000-201 | ENST00000483245 | 640 nt | TSL 2 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | TRBV12-2-201 | ENST00000489763 | 344 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC090833.1-202 | ENST00000511073 | 781 nt | TSL 3 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC010265.1-201 | ENST00000513509 | 211 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AP001267.3-202 | ENST00000525992 | 448 nt | TSL 3 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | RGS5-206 | ENST00000527988 | 373 nt | TSL 1 (best) BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC103796.1-201 | ENST00000530663 | 358 nt | TSL 1 (best) BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC104009.1-203 | ENST00000531304 | 571 nt | TSL 4 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | C1GALT1P1-201 | ENST00000548895 | 1089 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AL445363.1-202 | ENST00000553697 | 545 nt | TSL 3 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC087499.8-201 | ENST00000578406 | 226 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC115621.1-201 | ENST00000604653 | 858 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | SNORA62.6-201 | ENST00000606322 | 83 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | LINC00343-210 | ENST00000608220 | 806 nt | TSL 5 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | SATB1-AS1-226 | ENST00000625515 | 776 nt | TSL 5 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | SATB1-AS1-259 | ENST00000629477 | 853 nt | TSL 5 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | SPTY2D1-AS1-205 | ENST00000635674 | 450 nt | APPRIS ALT2 TSL 2 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | OR6C3-203 | ENST00000641740 | 1093 nt | APPRIS P1 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | GEN1-201 | ENST00000317402 | 9854 nt | APPRIS P1 TSL 2 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AC025125.1-201 | ENST00000624743 | 1922 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | RNF38-203 | ENST00000353739 | 4945 nt | TSL 1 (best) BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | SUGT1-201 | ENST00000310528 | 14131 nt | APPRIS P3 TSL 1 (best) BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | TET2-204 | ENST00000413648 | 4973 nt | TSL 1 (best) BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | GABRG2-215 | ENST00000639213 | 9960 nt | TSL 1 (best) BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | C18orf54-202 | ENST00000382911 | 4056 nt | TSL 5 BASIC | 3.16 | □□□□□ -1.9 | | |
| MUC1 | P15941 | DPP10-205 | ENST00000410059 | 6278 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.15 | □□□□□ -1.9 | | |
| MUC1 | P15941 | RNF13-202 | ENST00000361785 | 1939 nt | TSL 2 BASIC | 3.15 | □□□□□ -1.9 | | |
| MUC1 | P15941 | GABPAP-201 | ENST00000419271 | 1356 nt | BASIC | 3.15 | □□□□□ -1.9 | | |
| MUC1 | P15941 | AGL-205 | ENST00000370163 | 7166 nt | APPRIS P1 TSL 1 (best) BASIC | 3.15 | □□□□□ -1.9 | | |
| MUC1 | P15941 | POSTN-209 | ENST00000541179 | 3214 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.15 | □□□□□ -1.91 | | |
| MUC1 | P15941 | NTS-201 | ENST00000256010 | 1237 nt | APPRIS P1 TSL 1 (best) BASIC | 3.15 | □□□□□ -1.91 | | |
| MUC1 | P15941 | TNP2-201 | ENST00000312693 | 626 nt | APPRIS P1 TSL 1 (best) BASIC | 3.15 | □□□□□ -1.91 | | |
| MUC1 | P15941 | RNU6-244P-201 | ENST00000391028 | 104 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| MUC1 | P15941 | CFHR3-203 | ENST00000391985 | 1043 nt | TSL 2 BASIC | 3.15 | □□□□□ -1.91 | | |
| MUC1 | P15941 | FABP12P1-201 | ENST00000401911 | 322 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| MUC1 | P15941 | NT5C3A-205 | ENST00000409467 | 1032 nt | APPRIS ALT1 TSL 5 BASIC | 3.15 | □□□□□ -1.91 | | |
| MUC1 | P15941 | RN7SKP159-201 | ENST00000410657 | 292 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AC003092.2-201 | ENST00000411946 | 446 nt | TSL 2 BASIC | 3.15 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AL645465.1-201 | ENST00000417765 | 642 nt | TSL 3 BASIC | 3.15 | □□□□□ -1.91 | | |
| MUC1 | P15941 | TCEA1P2-201 | ENST00000420496 | 906 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| MUC1 | P15941 | LINC01204-201 | ENST00000422047 | 639 nt | TSL 3 BASIC | 3.15 | □□□□□ -1.91 | | |
| MUC1 | P15941 | TTC3-AS1-201 | ENST00000424733 | 1097 nt | TSL 1 (best) BASIC | 3.15 | □□□□□ -1.91 | | |
| MUC1 | P15941 | AP000855.1-201 | ENST00000433210 | 636 nt | TSL 2 BASIC | 3.15 | □□□□□ -1.91 | | |
| MUC1 | P15941 | MTCO1P52-201 | ENST00000433928 | 531 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| MUC1 | P15941 | CACYBPP1-201 | ENST00000438592 | 684 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| MUC1 | P15941 | SNORA71B-202 | ENST00000439232 | 272 nt | BASIC | 3.15 | □□□□□ -1.91 | | |