Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RB1P06400 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
RB1P06400 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RB1P06400 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RB1P06400 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.51□□□□□ -1.69
RB1P06400 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.5□□□□□ -1.69
RB1P06400 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.5□□□□□ -1.69
RB1P06400 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RB1P06400 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RB1P06400 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.5□□□□□ -1.69
RB1P06400 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RB1P06400 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RB1P06400 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RB1P06400 RNU6-761P-201ENST00000384148 107 ntBASIC4.5□□□□□ -1.69
RB1P06400 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.5□□□□□ -1.69
RB1P06400 AC114973.1-201ENST00000429057 632 ntBASIC4.5□□□□□ -1.69
RB1P06400 AL445584.1-201ENST00000431451 330 ntBASIC4.5□□□□□ -1.69
RB1P06400 GOT2P5-201ENST00000433995 546 ntBASIC4.5□□□□□ -1.69
RB1P06400 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.5□□□□□ -1.69
RB1P06400 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.5□□□□□ -1.69
RB1P06400 AL500522.2-201ENST00000448562 343 ntBASIC4.5□□□□□ -1.69
RB1P06400 MRPL42P4-201ENST00000453267 443 ntBASIC4.5□□□□□ -1.69
RB1P06400 RPS15AP1-201ENST00000457423 391 ntBASIC4.5□□□□□ -1.69
RB1P06400 AC069528.1-202ENST00000482888 637 ntBASIC4.5□□□□□ -1.69
RB1P06400 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.5□□□□□ -1.69
RB1P06400 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.5□□□□□ -1.69
RB1P06400 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RB1P06400 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.5□□□□□ -1.69
RB1P06400 RNU6-488P-201ENST00000515918 99 ntBASIC4.5□□□□□ -1.69
RB1P06400 RNA5SP446-201ENST00000515955 82 ntBASIC4.5□□□□□ -1.69
RB1P06400 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.5□□□□□ -1.69
RB1P06400 OR7E13P-201ENST00000526052 910 ntBASIC4.5□□□□□ -1.69
RB1P06400 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.5□□□□□ -1.69
RB1P06400 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.5□□□□□ -1.69
RB1P06400 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.5□□□□□ -1.69
RB1P06400 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.5□□□□□ -1.69
RB1P06400 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.5□□□□□ -1.69
RB1P06400 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.5□□□□□ -1.69
RB1P06400 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.5□□□□□ -1.69
RB1P06400 AP002360.3-201ENST00000607673 710 ntBASIC4.5□□□□□ -1.69
RB1P06400 AL592148.2-201ENST00000612210 372 ntBASIC4.5□□□□□ -1.69
RB1P06400 AC105227.2-201ENST00000615075 605 ntBASIC4.5□□□□□ -1.69
RB1P06400 AC244100.1-202ENST00000621554 382 ntBASIC4.5□□□□□ -1.69
RB1P06400 AC007546.2-201ENST00000623996 360 ntBASIC4.5□□□□□ -1.69
RB1P06400 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RB1P06400 AC126323.6-202ENST00000568092 3511 ntBASIC4.5□□□□□ -1.69
RB1P06400 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RB1P06400 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RB1P06400 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.5□□□□□ -1.69
RB1P06400 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.5□□□□□ -1.69
RB1P06400 AC107081.3-201ENST00000612715 2034 ntBASIC4.5□□□□□ -1.69
RB1P06400 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RB1P06400 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.49□□□□□ -1.69
RB1P06400 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RB1P06400 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RB1P06400 Y_RNA.333-201ENST00000365274 102 ntBASIC4.49□□□□□ -1.69
RB1P06400 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RB1P06400 MIR7-3-201ENST00000384898 110 ntBASIC4.49□□□□□ -1.69
RB1P06400 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RB1P06400 TMSB4XP8-201ENST00000402089 135 ntBASIC4.49□□□□□ -1.69
RB1P06400 AL590704.1-201ENST00000402856 794 ntBASIC4.49□□□□□ -1.69
RB1P06400 AL079342.2-201ENST00000403367 482 ntBASIC4.49□□□□□ -1.69
RB1P06400 TPT1P2-201ENST00000413105 503 ntBASIC4.49□□□□□ -1.69
RB1P06400 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.49□□□□□ -1.69
RB1P06400 TMSB4XP6-201ENST00000415187 135 ntBASIC4.49□□□□□ -1.69
RB1P06400 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.49□□□□□ -1.69
RB1P06400 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.49□□□□□ -1.69
RB1P06400 TMSB4XP1-201ENST00000424567 135 ntBASIC4.49□□□□□ -1.69
RB1P06400 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.49□□□□□ -1.69
RB1P06400 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.49□□□□□ -1.69
RB1P06400 RPL23AP83-201ENST00000434984 473 ntBASIC4.49□□□□□ -1.69
RB1P06400 YWHAZP8-201ENST00000436935 731 ntBASIC4.49□□□□□ -1.69
RB1P06400 AL606517.1-201ENST00000446914 387 ntBASIC4.49□□□□□ -1.69
RB1P06400 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.49□□□□□ -1.69
RB1P06400 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.49□□□□□ -1.69
RB1P06400 RPL38P1-201ENST00000460914 211 ntBASIC4.49□□□□□ -1.69
RB1P06400 RPL7P22-201ENST00000466005 733 ntBASIC4.49□□□□□ -1.69
RB1P06400 AC018635.1-201ENST00000468292 1030 ntBASIC4.49□□□□□ -1.69
RB1P06400 GAPDHP36-201ENST00000480688 918 ntBASIC4.49□□□□□ -1.69
RB1P06400 AC090071.1-201ENST00000507713 644 ntBASIC4.49□□□□□ -1.69
RB1P06400 OR5H4P-201ENST00000510851 923 ntBASIC4.49□□□□□ -1.69
RB1P06400 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.49□□□□□ -1.69
RB1P06400 RN7SKP82-201ENST00000516786 223 ntBASIC4.49□□□□□ -1.69
RB1P06400 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.49□□□□□ -1.69
RB1P06400 AC074029.1-201ENST00000552531 1044 ntBASIC4.49□□□□□ -1.69
RB1P06400 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.49□□□□□ -1.69
RB1P06400 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.49□□□□□ -1.69
RB1P06400 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.49□□□□□ -1.69
RB1P06400 MTND1P8-201ENST00000571424 950 ntBASIC4.49□□□□□ -1.69
RB1P06400 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.49□□□□□ -1.69
RB1P06400 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.49□□□□□ -1.69
RB1P06400 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.49□□□□□ -1.69
RB1P06400 AL157392.4-201ENST00000609756 345 ntBASIC4.49□□□□□ -1.69
RB1P06400 AL359535.1-201ENST00000612100 1087 ntBASIC4.49□□□□□ -1.69
RB1P06400 AL050303.3-201ENST00000613704 284 ntBASIC4.49□□□□□ -1.69
RB1P06400 AC091046.2-201ENST00000620775 665 ntBASIC4.49□□□□□ -1.69
RB1P06400 MIR6500-201ENST00000622700 86 ntBASIC4.49□□□□□ -1.69
RB1P06400 AC087821.2-201ENST00000637086 450 ntBASIC4.49□□□□□ -1.69
RB1P06400 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.49□□□□□ -1.69
RB1P06400 AC016588.2-201ENST00000632484 3021 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms