Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PWAR6-201ENST00000552334 4618 ntBASIC3.15□□□□□ -1.91
CD74P04233 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.15□□□□□ -1.91
CD74P04233 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CD74P04233 MIR383-201ENST00000362257 73 ntBASIC3.15□□□□□ -1.91
CD74P04233 RNA5SP42-201ENST00000364278 115 ntBASIC3.15□□□□□ -1.91
CD74P04233 RN7SKP227-201ENST00000364445 330 ntBASIC3.15□□□□□ -1.91
CD74P04233 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.15□□□□□ -1.91
CD74P04233 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.15□□□□□ -1.91
CD74P04233 RNU6-452P-201ENST00000384406 107 ntBASIC3.15□□□□□ -1.91
CD74P04233 ENSAP1-201ENST00000392855 326 ntBASIC3.15□□□□□ -1.91
CD74P04233 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CD74P04233 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.15□□□□□ -1.91
CD74P04233 MTND4P24-201ENST00000424002 397 ntBASIC3.15□□□□□ -1.91
CD74P04233 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.15□□□□□ -1.91
CD74P04233 TBCAP1-201ENST00000436520 327 ntBASIC3.15□□□□□ -1.91
CD74P04233 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.15□□□□□ -1.91
CD74P04233 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.15□□□□□ -1.91
CD74P04233 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.15□□□□□ -1.91
CD74P04233 MTCO3P43-201ENST00000440974 771 ntBASIC3.15□□□□□ -1.91
CD74P04233 RPS15AP29-201ENST00000445539 400 ntBASIC3.15□□□□□ -1.91
CD74P04233 MTND5P8-201ENST00000449817 1083 ntBASIC3.15□□□□□ -1.91
CD74P04233 AC089999.1-201ENST00000460336 374 ntBASIC3.15□□□□□ -1.91
CD74P04233 AC010401.1-201ENST00000463867 348 ntBASIC3.15□□□□□ -1.91
CD74P04233 AP000893.1-201ENST00000474462 794 ntBASIC3.15□□□□□ -1.91
CD74P04233 TRBV8-2-201ENST00000475637 270 ntBASIC3.15□□□□□ -1.91
CD74P04233 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.15□□□□□ -1.91
CD74P04233 AC138701.1-201ENST00000524329 714 ntBASIC3.15□□□□□ -1.91
CD74P04233 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.15□□□□□ -1.91
CD74P04233 AP002812.4-201ENST00000532139 286 ntBASIC3.15□□□□□ -1.91
CD74P04233 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.15□□□□□ -1.91
CD74P04233 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.15□□□□□ -1.91
CD74P04233 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.15□□□□□ -1.91
CD74P04233 SNRPGP1-201ENST00000553864 222 ntBASIC3.15□□□□□ -1.91
CD74P04233 AL389895.1-201ENST00000554127 252 ntBASIC3.15□□□□□ -1.91
CD74P04233 AC023575.1-201ENST00000580510 358 ntBASIC3.15□□□□□ -1.91
CD74P04233 AC010928.3-201ENST00000587712 541 ntBASIC3.15□□□□□ -1.91
CD74P04233 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.15□□□□□ -1.91
CD74P04233 SUMO2P14-201ENST00000604488 293 ntBASIC3.15□□□□□ -1.91
CD74P04233 SNORA62.6-201ENST00000606322 83 ntBASIC3.15□□□□□ -1.91
CD74P04233 AC110792.4-201ENST00000609843 298 ntBASIC3.15□□□□□ -1.91
CD74P04233 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CD74P04233 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.15□□□□□ -1.91
CD74P04233 AL163152.1-201ENST00000642001 374 ntBASIC3.15□□□□□ -1.91
CD74P04233 AL732372.2-225ENST00000642124 456 ntBASIC3.15□□□□□ -1.91
CD74P04233 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CD74P04233 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.15□□□□□ -1.91
CD74P04233 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CD74P04233 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.14□□□□□ -1.91
CD74P04233 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CD74P04233 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CD74P04233 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CD74P04233 AL157700.1-201ENST00000561973 1432 ntBASIC3.14□□□□□ -1.91
CD74P04233 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CD74P04233 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CD74P04233 RNA5SP424-201ENST00000390988 115 ntBASIC3.14□□□□□ -1.91
CD74P04233 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.14□□□□□ -1.91
CD74P04233 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CD74P04233 HMGB3P20-201ENST00000417997 600 ntBASIC3.14□□□□□ -1.91
CD74P04233 Z97055.1-201ENST00000419730 712 ntBASIC3.14□□□□□ -1.91
CD74P04233 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CD74P04233 TCEA1P2-201ENST00000420496 906 ntBASIC3.14□□□□□ -1.91
CD74P04233 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.14□□□□□ -1.91
CD74P04233 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.14□□□□□ -1.91
CD74P04233 FAM204CP-201ENST00000424489 642 ntBASIC3.14□□□□□ -1.91
CD74P04233 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.14□□□□□ -1.91
CD74P04233 NEK4P1-201ENST00000433383 879 ntBASIC3.14□□□□□ -1.91
CD74P04233 SETP5-201ENST00000437270 562 ntBASIC3.14□□□□□ -1.91
CD74P04233 BTBD7P2-201ENST00000441962 620 ntBASIC3.14□□□□□ -1.91
CD74P04233 AC239367.2-201ENST00000447309 705 ntBASIC3.14□□□□□ -1.91
CD74P04233 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.14□□□□□ -1.91
CD74P04233 RN7SL303P-201ENST00000469773 251 ntBASIC3.14□□□□□ -1.91
CD74P04233 AC010618.1-201ENST00000469924 477 ntBASIC3.14□□□□□ -1.91
CD74P04233 AC087312.1-201ENST00000471411 480 ntBASIC3.14□□□□□ -1.91
CD74P04233 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
CD74P04233 RPL31P13-201ENST00000484151 370 ntBASIC3.14□□□□□ -1.91
CD74P04233 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.14□□□□□ -1.91
CD74P04233 AL035404.1-201ENST00000497982 568 ntBASIC3.14□□□□□ -1.91
CD74P04233 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.14□□□□□ -1.91
CD74P04233 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.14□□□□□ -1.91
CD74P04233 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.14□□□□□ -1.91
CD74P04233 AP006245.1-201ENST00000522549 120 ntBASIC3.14□□□□□ -1.91
CD74P04233 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.14□□□□□ -1.91
CD74P04233 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.14□□□□□ -1.91
CD74P04233 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.14□□□□□ -1.91
CD74P04233 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CD74P04233 AL731537.2-201ENST00000561565 951 ntBASIC3.14□□□□□ -1.91
CD74P04233 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.14□□□□□ -1.91
CD74P04233 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.14□□□□□ -1.91
CD74P04233 KPNA2P3-201ENST00000584190 848 ntBASIC3.14□□□□□ -1.91
CD74P04233 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
CD74P04233 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.14□□□□□ -1.91
CD74P04233 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CD74P04233 AC011468.4-201ENST00000603942 409 ntBASIC3.14□□□□□ -1.91
CD74P04233 AL163642.2-201ENST00000604722 1019 ntBASIC3.14□□□□□ -1.91
CD74P04233 AL354760.1-201ENST00000608357 643 ntBASIC3.14□□□□□ -1.91
CD74P04233 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.14□□□□□ -1.91
CD74P04233 AC068831.8-201ENST00000620171 435 ntBASIC3.14□□□□□ -1.91
CD74P04233 MIR3653-201ENST00000625572 110 ntBASIC3.14□□□□□ -1.91
CD74P04233 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.14□□□□□ -1.91
CD74P04233 AC091152.2-201ENST00000591628 2569 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms