Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.8□□□□□ -1.8
CTDNEP1O95476 RPS3AP25-201ENST00000411660 793 ntBASIC3.8□□□□□ -1.8
CTDNEP1O95476 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.8□□□□□ -1.8
CTDNEP1O95476 RPL31P12-201ENST00000422587 358 ntBASIC3.8□□□□□ -1.8
CTDNEP1O95476 AC093698.1-201ENST00000423843 571 ntBASIC3.8□□□□□ -1.8
CTDNEP1O95476 AL138785.1-201ENST00000425821 331 ntBASIC3.8□□□□□ -1.8
CTDNEP1O95476 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.8□□□□□ -1.8
CTDNEP1O95476 EIF2S2P4-201ENST00000461070 984 ntBASIC3.8□□□□□ -1.8
CTDNEP1O95476 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.8□□□□□ -1.8
CTDNEP1O95476 RPS4XP22-201ENST00000480755 780 ntBASIC3.8□□□□□ -1.8
CTDNEP1O95476 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.8□□□□□ -1.8
CTDNEP1O95476 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTDNEP1O95476 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.8□□□□□ -1.8
CTDNEP1O95476 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.8□□□□□ -1.8
CTDNEP1O95476 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.8□□□□□ -1.8
CTDNEP1O95476 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.8□□□□□ -1.8
CTDNEP1O95476 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.8□□□□□ -1.8
CTDNEP1O95476 MIR2682-201ENST00000580305 110 ntBASIC3.8□□□□□ -1.8
CTDNEP1O95476 ZNF415P1-201ENST00000582279 1166 ntBASIC3.8□□□□□ -1.8
CTDNEP1O95476 MIR4276-201ENST00000584832 70 ntBASIC3.8□□□□□ -1.8
CTDNEP1O95476 AL162713.1-201ENST00000604480 262 ntBASIC3.8□□□□□ -1.8
CTDNEP1O95476 BNIP3P7-201ENST00000605641 516 ntBASIC3.8□□□□□ -1.8
CTDNEP1O95476 AC100793.4-201ENST00000613683 429 ntBASIC3.8□□□□□ -1.8
CTDNEP1O95476 AC073476.4-201ENST00000628409 72 ntBASIC3.8□□□□□ -1.8
CTDNEP1O95476 U6.105-201ENST00000637379 88 ntBASIC3.8□□□□□ -1.8
CTDNEP1O95476 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.8□□□□□ -1.8
CTDNEP1O95476 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.8□□□□□ -1.8
CTDNEP1O95476 MTCO1P8-201ENST00000416914 1523 ntBASIC3.8□□□□□ -1.8
CTDNEP1O95476 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.8□□□□□ -1.8
CTDNEP1O95476 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTDNEP1O95476 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTDNEP1O95476 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTDNEP1O95476 SNORD56.3-201ENST00000363507 71 ntBASIC3.79□□□□□ -1.8
CTDNEP1O95476 SNORA62.2-201ENST00000364672 152 ntBASIC3.79□□□□□ -1.8
CTDNEP1O95476 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 MIR183-201ENST00000384958 110 ntBASIC3.79□□□□□ -1.8
CTDNEP1O95476 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTDNEP1O95476 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 AC097713.2-201ENST00000430199 356 ntBASIC3.79□□□□□ -1.8
CTDNEP1O95476 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTDNEP1O95476 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTDNEP1O95476 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 MTND6P6-201ENST00000478031 263 ntBASIC3.79□□□□□ -1.8
CTDNEP1O95476 AP000926.1-201ENST00000479573 241 ntBASIC3.79□□□□□ -1.8
CTDNEP1O95476 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 RN7SKP157-201ENST00000516174 282 ntBASIC3.79□□□□□ -1.8
CTDNEP1O95476 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 SMARCE1P4-201ENST00000523647 241 ntBASIC3.79□□□□□ -1.8
CTDNEP1O95476 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 AC009948.4-201ENST00000604692 675 ntBASIC3.79□□□□□ -1.8
CTDNEP1O95476 AC245389.1-201ENST00000605141 529 ntBASIC3.79□□□□□ -1.8
CTDNEP1O95476 AC110741.2-201ENST00000605278 268 ntBASIC3.79□□□□□ -1.8
CTDNEP1O95476 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 AC092354.2-201ENST00000607786 514 ntBASIC3.79□□□□□ -1.8
CTDNEP1O95476 AC007620.3-201ENST00000608131 497 ntBASIC3.79□□□□□ -1.8
CTDNEP1O95476 AC117490.2-201ENST00000610042 594 ntBASIC3.79□□□□□ -1.8
CTDNEP1O95476 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 AC009452.1-201ENST00000640823 606 ntBASIC3.79□□□□□ -1.8
CTDNEP1O95476 AC004972.1-201ENST00000623934 2209 ntBASIC3.79□□□□□ -1.8
CTDNEP1O95476 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.79□□□□□ -1.8
CTDNEP1O95476 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CTDNEP1O95476 RNA5SP50-201ENST00000363731 107 ntBASIC3.78□□□□□ -1.8
CTDNEP1O95476 SNORA62.3-201ENST00000365110 153 ntBASIC3.78□□□□□ -1.8
CTDNEP1O95476 RNU6-225P-201ENST00000384613 103 ntBASIC3.78□□□□□ -1.8
CTDNEP1O95476 RNA5SP107-201ENST00000411358 122 ntBASIC3.78□□□□□ -1.8
CTDNEP1O95476 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.78□□□□□ -1.8
CTDNEP1O95476 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.78□□□□□ -1.8
CTDNEP1O95476 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.78□□□□□ -1.8
CTDNEP1O95476 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CTDNEP1O95476 AC017083.1-201ENST00000428093 483 ntBASIC3.78□□□□□ -1.8
CTDNEP1O95476 FTH1P6-201ENST00000430768 320 ntBASIC3.78□□□□□ -1.8
CTDNEP1O95476 CST9LP2-201ENST00000437612 320 ntBASIC3.78□□□□□ -1.8
CTDNEP1O95476 Z95327.1-201ENST00000446082 482 ntBASIC3.78□□□□□ -1.8
CTDNEP1O95476 HMGB3P21-201ENST00000452483 547 ntBASIC3.78□□□□□ -1.8
CTDNEP1O95476 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.78□□□□□ -1.8
CTDNEP1O95476 OR52A4P-203ENST00000498233 1014 ntBASIC3.78□□□□□ -1.8
CTDNEP1O95476 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.78□□□□□ -1.8
CTDNEP1O95476 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.78□□□□□ -1.8
CTDNEP1O95476 AP001207.2-201ENST00000519490 539 ntBASIC3.78□□□□□ -1.8
CTDNEP1O95476 RFPL1S-203ENST00000539579 330 ntBASIC3.78□□□□□ -1.8
CTDNEP1O95476 AC068714.1-201ENST00000559623 800 ntBASIC3.78□□□□□ -1.8
CTDNEP1O95476 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.78□□□□□ -1.8
CTDNEP1O95476 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.78□□□□□ -1.8
CTDNEP1O95476 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.78□□□□□ -1.8
CTDNEP1O95476 MIR4444-1-201ENST00000581696 74 ntBASIC3.78□□□□□ -1.8
CTDNEP1O95476 MIR4444-2-201ENST00000584390 74 ntBASIC3.78□□□□□ -1.8
CTDNEP1O95476 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CTDNEP1O95476 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CTDNEP1O95476 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CTDNEP1O95476 AC095050.2-201ENST00000510748 1458 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms