Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 RPL23AP22-201ENST00000437556 453 ntBASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 AL136097.1-201ENST00000456945 913 ntBASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 RNU6-1218P-201ENST00000458990 108 ntBASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 RPL23AP62-201ENST00000463396 453 ntBASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 AC093663.1-201ENST00000497190 394 ntBASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 AC114967.1-201ENST00000504890 259 ntBASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 RNA5SP217-201ENST00000515959 91 ntBASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 AC023632.4-201ENST00000517783 191 ntBASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 MIR5186-201ENST00000577504 120 ntBASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 AL365400.2-201ENST00000605604 902 ntBASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRAV27A0A087WT01 AL356317.1-201ENST00000396110 1436 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 SYT14P1-202ENST00000600441 1448 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 AL592494.2-201ENST00000425455 1548 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 U3.11-201ENST00000364476 212 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 AC025750.1-201ENST00000399891 379 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 EIF2S2P3-201ENST00000428356 999 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 AC091286.1-201ENST00000431233 461 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 HMGN2P31-201ENST00000432430 273 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 FTH1P1-201ENST00000437933 532 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 AC245517.2-201ENST00000442890 346 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 AP000873.1-201ENST00000463987 400 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 Vault.1-201ENST00000516474 102 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 IGKV2-23-201ENST00000518729 323 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 NPM1P35-201ENST00000533043 868 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 AC007458.1-201ENST00000542812 373 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 AL161713.1-201ENST00000555538 145 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 AC006130.2-201ENST00000586202 326 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 VN1R81P-201ENST00000602085 372 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 AC107081.3-201ENST00000612715 2034 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.93□□□□□ -1.94
TRAV27A0A087WT01 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 RNU6-1331P-201ENST00000363658 106 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 MIR490-201ENST00000384865 128 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 RPL32P35-201ENST00000415214 394 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 AC245052.5-201ENST00000416320 649 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 RPL36AP36-201ENST00000418616 301 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 GOT2P5-201ENST00000433995 546 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 AC122718.1-201ENST00000439448 744 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 UBE2V2P4-201ENST00000447495 259 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 RPL21P13-201ENST00000488305 481 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 AC012170.1-201ENST00000495139 359 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 AC021678.1-201ENST00000505195 936 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms