Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 RPL21P91-201ENST00000429231 479 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 RPL7P52-201ENST00000449200 742 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 AC109925.1-201ENST00000478069 331 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 AP000942.3-201ENST00000603702 160 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 Y_RNA.36-201ENST00000362602 112 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 HMGB3P21-201ENST00000452483 547 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 OR6R2P-201ENST00000609216 300 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 AC130448.2-201ENST00000624082 374 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 ICE2P2-201ENST00000483823 2787 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 SETP4-201ENST00000455717 868 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 AC107398.1-201ENST00000486904 505 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 AC069209.1-201ENST00000619282 651 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 OR52E3P-201ENST00000452083 936 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 RPL5P13-201ENST00000462840 709 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 RNU6-666P-201ENST00000363499 107 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 SNORD66.1-201ENST00000391230 76 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 AL080315.1-201ENST00000406055 466 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 AC107081.1-201ENST00000414975 361 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 FTH1P12-201ENST00000432137 551 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 HIGD1AP13-201ENST00000509878 289 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 AC067852.3-201ENST00000589177 561 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 RMST_2.1-201ENST00000617263 136 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 MIR6086-201ENST00000638065 55 ntBASIC1.38□□□□□ -2.19
MACF1Q9UPN3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC1.38□□□□□ -2.19
MACF1Q9UPN3 MIR181A2-201ENST00000384863 110 ntBASIC1.37□□□□□ -2.19
MACF1Q9UPN3 Z99755.1-201ENST00000414048 380 ntBASIC1.37□□□□□ -2.19
MACF1Q9UPN3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC1.37□□□□□ -2.19
MACF1Q9UPN3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC1.37□□□□□ -2.19
MACF1Q9UPN3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC1.37□□□□□ -2.19
MACF1Q9UPN3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.37□□□□□ -2.19
MACF1Q9UPN3 AL049840.6-202ENST00000603373 279 ntBASIC1.37□□□□□ -2.19
MACF1Q9UPN3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC1.37□□□□□ -2.19
MACF1Q9UPN3 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC1.37□□□□□ -2.19
MACF1Q9UPN3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC1.37□□□□□ -2.19
MACF1Q9UPN3 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
MACF1Q9UPN3 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
MACF1Q9UPN3 MIR921-201ENST00000401133 56 ntBASIC1.37□□□□□ -2.19
MACF1Q9UPN3 RN7SKP282-201ENST00000516824 299 ntBASIC1.37□□□□□ -2.19
MACF1Q9UPN3 AC007599.1-201ENST00000568688 1174 ntBASIC1.37□□□□□ -2.19
MACF1Q9UPN3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.37□□□□□ -2.19
MACF1Q9UPN3 AC123768.4-201ENST00000616244 701 ntBASIC1.37□□□□□ -2.19
MACF1Q9UPN3 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
MACF1Q9UPN3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
MACF1Q9UPN3 AC012020.1-201ENST00000624541 1728 ntBASIC1.37□□□□□ -2.19
MACF1Q9UPN3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC1.37□□□□□ -2.19
MACF1Q9UPN3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
MACF1Q9UPN3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
MACF1Q9UPN3 RPL21P67-201ENST00000402896 478 ntBASIC1.37□□□□□ -2.19
MACF1Q9UPN3 MIR1276-201ENST00000408707 83 ntBASIC1.37□□□□□ -2.19
MACF1Q9UPN3 RN7SKP53-201ENST00000411337 315 ntBASIC1.37□□□□□ -2.19
MACF1Q9UPN3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms