Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RPL23AP71-201ENST00000470966 469 ntBASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 SUMO2P4-201ENST00000504193 276 ntBASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 AC108471.1-201ENST00000513977 287 ntBASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 MTCO1P30-201ENST00000515244 580 ntBASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 RNU6-506P-201ENST00000516553 94 ntBASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 AC022832.1-201ENST00000530718 645 ntBASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 AC083760.1-201ENST00000589621 670 ntBASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 AC005084.1-201ENST00000605160 304 ntBASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 AC079228.1-201ENST00000624774 1049 ntBASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 AC073869.7-201ENST00000640874 297 ntBASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHAMP1Q96JM3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
CHAMP1Q96JM3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CHAMP1Q96JM3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
CHAMP1Q96JM3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CHAMP1Q96JM3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CHAMP1Q96JM3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 AC006484.1-201ENST00000435086 1884 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 ZNF37BP-203ENST00000452306 1352 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 OR52E6-202ENST00000379946 954 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 SNORA67-201ENST00000384423 137 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 CYB5AP4-201ENST00000396692 399 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 EI24P3-201ENST00000399046 1062 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 AL359643.1-201ENST00000404109 423 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 AC022022.1-201ENST00000430304 178 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 RAB11AP1-201ENST00000442978 646 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 AL671855.1-201ENST00000446875 1203 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 EEF1E1P1-201ENST00000446998 430 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 BX284632.1-201ENST00000478218 541 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 RPS21P4-201ENST00000487122 248 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 RPS3AP4-201ENST00000555161 764 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 AC018552.1-201ENST00000562099 811 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 AF250324.2-201ENST00000608299 610 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 AC069234.5-201ENST00000611056 416 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 AL627230.1-201ENST00000613077 211 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 AL591926.8-201ENST00000616876 211 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 CYP1D1P-201ENST00000416662 1433 ntBASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.71□□□□□ -1.5
CHAMP1Q96JM3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 VPS35P1-201ENST00000563400 1518 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AL442128.2-201ENST00000620246 1824 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 RNU5F-6P-201ENST00000362979 116 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 RNU6-216P-201ENST00000363282 104 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 Y_RNA.390-201ENST00000383932 102 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 RNU6-297P-201ENST00000384636 107 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 Y_RNA.582-201ENST00000391023 95 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC092634.6-201ENST00000418558 192 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 E2F6P2-201ENST00000420708 748 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC009237.2-201ENST00000421358 284 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 ISCA1P1-201ENST00000426679 387 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC073069.1-201ENST00000428657 441 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 RPS24P8-201ENST00000431490 402 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 194.7 ms