Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RPL7P61-201ENST00000451721 751 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 PNPLA4P1-201ENST00000458328 305 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 snoU109.3-201ENST00000459477 145 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 RN7SL177P-201ENST00000476596 299 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 OR5H5P-201ENST00000503164 928 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC023141.12-201ENST00000512399 199 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 SNORA19.3-201ENST00000516165 130 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 RN7SKP116-201ENST00000516902 319 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC091163.3-201ENST00000518269 1144 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 IGKV2D-36-201ENST00000518643 226 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC027309.2-201ENST00000520566 192 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC135001.1-201ENST00000544546 283 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC006270.2-201ENST00000578523 652 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AL355812.1-201ENST00000603215 216 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC112230.1-201ENST00000604342 547 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC092953.2-201ENST00000608000 699 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AL354976.1-201ENST00000613843 387 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC233309.1-201ENST00000619522 751 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AL359715.5-201ENST00000623431 443 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC018555.1-201ENST00000567548 1980 ntBASIC4.14□□□□□ -1.75
VPS33AQ96AX1 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS33AQ96AX1 DHX40P1-201ENST00000588725 1412 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 Z99496.1-201ENST00000469424 1477 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AC027287.1-201ENST00000553115 1453 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 RNA5SP167-201ENST00000365461 116 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 RN7SKP269-201ENST00000365545 319 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 RNU6-925P-201ENST00000384629 104 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 MT-TC-201ENST00000387405 66 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 SNORD65.1-201ENST00000390889 71 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 RNA5SP397-201ENST00000391323 118 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 JKAMPP1-201ENST00000413804 919 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AC093698.1-201ENST00000423843 571 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 OSTCP5-201ENST00000425293 453 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AC114495.1-201ENST00000441274 436 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 HMGB3P6-201ENST00000444896 598 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 MTCO1P48-201ENST00000448024 1096 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 RN7SL585P-201ENST00000470538 280 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AC078918.1-201ENST00000498515 228 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AC084024.2-201ENST00000503480 791 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 PRELID3BP6-201ENST00000503839 571 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 MTCYBP37-201ENST00000510642 1133 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 SNORA48.10-201ENST00000516965 160 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AP001207.2-201ENST00000519490 539 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AP001922.4-201ENST00000526967 290 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AP000676.2-201ENST00000529711 301 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 OR4A12P-201ENST00000530847 918 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AP003385.6-201ENST00000531603 374 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AP006289.1-201ENST00000538089 277 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AC012603.1-201ENST00000606424 528 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AL133243.1-201ENST00000614487 366 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 MIR7155-201ENST00000615925 56 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AC099654.9-201ENST00000637055 678 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.13□□□□□ -1.75
VPS33AQ96AX1 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS33AQ96AX1 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms