Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC092324.1-201ENST00000468671 324 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC084198.1-201ENST00000477747 402 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 MTND3P6-201ENST00000485242 339 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 UBA52P7-201ENST00000486088 380 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC093278.1-201ENST00000494700 600 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC105233.1-201ENST00000498840 781 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC108078.3-201ENST00000502633 489 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC008565.1-201ENST00000509046 885 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 RPL7L1P13-201ENST00000511702 739 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 BTF3P13-201ENST00000513224 490 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 MTND5P4-201ENST00000514978 288 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 MTND1P6-201ENST00000523621 946 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 MTND2P26-201ENST00000528255 1029 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC021006.3-201ENST00000530771 192 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC109635.4-202ENST00000531666 412 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 CYCSP29-201ENST00000533731 318 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC008033.2-201ENST00000542626 177 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 NBEAP1-201ENST00000554452 979 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 DNAJC8P1-201ENST00000554535 372 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC090695.1-201ENST00000561269 1222 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 MTCO3P13-201ENST00000577757 781 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC091042.1-201ENST00000579213 173 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 MIR4271-201ENST00000582451 67 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC005191.1-201ENST00000603950 358 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC020923.1-201ENST00000624021 917 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC015726.3-201ENST00000624501 418 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AL049767.1-202ENST00000637826 242 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 CASC19-261ENST00000641853 1638 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 AC017071.1-201ENST00000564407 2204 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 SAGE4P-201ENST00000442271 3381 ntBASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
SPTSSBQ8NFR3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AL137100.1-201ENST00000556703 1620 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC006378.2-201ENST00000623178 2476 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC107977.1-201ENST00000355745 939 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 RNU6-317P-201ENST00000384031 107 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 RNA5SP498-201ENST00000411342 120 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 ELOCP13-201ENST00000443934 329 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 SETD6P1-201ENST00000444575 317 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AL357552.1-201ENST00000445254 415 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 BX276092.4-201ENST00000452056 248 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AP002345.1-201ENST00000456493 928 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC023598.1-201ENST00000472521 361 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 RN7SL174P-201ENST00000475578 289 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 RN7SL717P-201ENST00000478343 297 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 GAPDHP36-201ENST00000480688 918 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 RN7SL604P-201ENST00000492589 296 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 OR5H3P-201ENST00000502817 919 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC118282.1-201ENST00000506408 765 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 SEM1P1-201ENST00000506694 209 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 HIGD1AP14-201ENST00000507617 282 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC093824.1-201ENST00000508796 343 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC119751.1-201ENST00000513357 765 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 RNA5SP519-201ENST00000516480 119 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AP001922.4-201ENST00000526967 290 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 MED28P5-201ENST00000528254 438 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms