Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MTATP6P22-201ENST00000507369 598 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 GTF2IP8-201ENST00000560687 584 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 MIR4286-201ENST00000580651 93 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 MRPS35P3-201ENST00000603189 709 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AC024220.1-201ENST00000603675 484 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AC025588.2-201ENST00000604851 466 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AC007349.4-201ENST00000608114 532 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 MIR6867-201ENST00000610636 67 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 MIR6075-201ENST00000620782 95 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AC006927.4-201ENST00000639187 543 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AL596275.2-204ENST00000641628 552 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AL596275.2-206ENST00000641957 626 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 AC000123.3-201ENST00000624029 4975 ntBASIC4.82□□□□□ -1.64
HERC6Q8IVU3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HERC6Q8IVU3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 MAPK10-320ENST00000641462 6696 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 RNA5SP513-201ENST00000364648 118 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC019155.1-201ENST00000382242 574 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 CYCSP19-201ENST00000411715 316 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC009237.10-201ENST00000414112 510 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 NUP35P2-201ENST00000416748 943 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AL139095.3-201ENST00000419672 1203 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AL138785.1-201ENST00000425821 331 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 RPL7P2-201ENST00000427639 268 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 IFNNP1-201ENST00000429219 553 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 RPL21P89-201ENST00000444021 467 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC079804.1-201ENST00000461922 436 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC010307.1-201ENST00000467206 836 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 RPL35P6-201ENST00000490024 372 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC008958.1-201ENST00000511047 682 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC108064.1-201ENST00000513791 460 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC061975.8-201ENST00000587058 721 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 MTND3P19-201ENST00000603825 345 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 SNORD91B-202ENST00000608459 222 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC097478.2-201ENST00000610572 514 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC087683.2-201ENST00000611384 326 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC109809.1-201ENST00000619665 545 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AC026634.1-201ENST00000634369 198 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 MTND5P28-201ENST00000438005 1594 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 AL049555.1-201ENST00000562834 1933 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HERC6Q8IVU3 NEAT1-202ENST00000501122 22743 ntBASIC4.81□□□□□ -1.64
HERC6Q8IVU3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 LINC00622-201ENST00000562811 1570 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 TAS2R15P-201ENST00000390674 928 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 PTMAP2-201ENST00000397627 327 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 AL590084.1-201ENST00000407885 387 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 RN7SKP159-201ENST00000410657 292 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 RPL21P43-201ENST00000425440 472 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 NMNAT1P2-201ENST00000435192 860 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 RPL23AP52-201ENST00000439311 478 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 RPL5P24-201ENST00000463742 885 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 AC108751.2-201ENST00000469993 231 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 AP000893.1-201ENST00000474462 794 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms