Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC063976.2-201ENST00000425667 3556 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 MAPK10-286ENST00000641208 8747 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AP000756.2-201ENST00000624168 2567 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 RNU6-115P-201ENST00000364310 107 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 Y_RNA.560-201ENST00000384689 102 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 RN7SKP27-201ENST00000410684 333 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AC114755.2-201ENST00000413520 361 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AC234779.1-201ENST00000425910 285 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AC016831.4-201ENST00000438302 307 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 ELOCP8-201ENST00000439309 332 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 ELOCP15-201ENST00000442090 332 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AC004980.3-201ENST00000447046 365 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 BX842559.2-201ENST00000451418 605 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AC091180.1-201ENST00000462104 372 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AC013356.1-201ENST00000489027 564 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AC083829.1-201ENST00000503756 657 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 HMGB3P16-201ENST00000508037 287 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 HNRNPKP5-201ENST00000515300 253 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 RFPL1S-203ENST00000539579 330 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AC007115.1-201ENST00000546853 234 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 BNIP3P5-201ENST00000562290 498 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AP001981.2-201ENST00000603241 418 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 FAM27B-201ENST00000610601 213 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AC104073.3-201ENST00000610942 955 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AC004223.4-201ENST00000612426 332 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 AC019206.1-201ENST00000621938 425 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 Z69908.1-201ENST00000622603 247 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 A2MP1-204ENST00000566278 4130 ntBASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A4Q53GD3 OR14L1P-202ENST00000641545 3009 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 AC010329.2-201ENST00000595195 2737 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 SNORD113.2-201ENST00000364166 89 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 SNORA4.1-201ENST00000364263 144 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 MTCO3P31-201ENST00000405526 789 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 AL355379.1-201ENST00000405542 640 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 MIR1193-201ENST00000408109 78 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 ELOCP19-201ENST00000411919 318 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 AL592293.2-201ENST00000422292 996 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 AL732292.1-201ENST00000426692 226 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 COX6CP13-201ENST00000428703 226 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 AC004975.1-201ENST00000428733 208 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 RPL31P54-201ENST00000429803 370 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 RPL7L1P1-201ENST00000448259 785 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 MTCO2P18-201ENST00000457151 658 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 AC113430.1-201ENST00000506872 718 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 MTCO3P7-201ENST00000510008 774 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 RN7SKP21-201ENST00000516503 220 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 AC134698.4-201ENST00000523451 826 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 MIR3915-201ENST00000578518 97 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 MIR1254-2-201ENST00000579553 63 ntBASIC5.02□□□□□ -1.61
SLC44A4Q53GD3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms