Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRAMEP78395 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
PRAMEP78395 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRAMEP78395 MFSD8-220ENST00000641243 1422 ntBASIC4.37□□□□□ -1.71
PRAMEP78395 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRAMEP78395 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.37□□□□□ -1.71
PRAMEP78395 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.36□□□□□ -1.71
PRAMEP78395 AC025031.4-201ENST00000621248 3271 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PRAMEP78395 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.36□□□□□ -1.71
PRAMEP78395 AC117529.2-201ENST00000512159 2068 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 AC008033.1-201ENST00000216407 1162 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 AC103591.2-201ENST00000265259 766 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 RNA5SP505-201ENST00000364748 108 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 SNORD116.1-201ENST00000365628 92 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 RNU6-1226P-201ENST00000384317 107 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 MIR649-201ENST00000384843 97 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 MIR153-1-201ENST00000384914 90 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 MIR129-1-201ENST00000384972 72 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 ANAPC10P1-201ENST00000395991 556 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.36□□□□□ -1.71
PRAMEP78395 TMSB10P2-201ENST00000416049 131 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.36□□□□□ -1.71
PRAMEP78395 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 AC092634.6-201ENST00000418558 192 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 KRR1P1-201ENST00000419430 803 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.36□□□□□ -1.71
PRAMEP78395 EIF1P3-201ENST00000423841 334 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 AC096632.1-201ENST00000427395 310 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 RPL31P54-201ENST00000429803 370 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 PRELID3BP10-201ENST00000431957 584 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.36□□□□□ -1.71
PRAMEP78395 PTENP1-201ENST00000447117 1215 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 NDUFS5P3-201ENST00000450668 321 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.36□□□□□ -1.71
PRAMEP78395 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.36□□□□□ -1.71
PRAMEP78395 PRELID3BP7-201ENST00000503606 469 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 AK3P4-201ENST00000504283 583 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.36□□□□□ -1.71
PRAMEP78395 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.36□□□□□ -1.71
PRAMEP78395 RNU6-311P-201ENST00000516224 102 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 IGLVIV-65-201ENST00000517313 360 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 AP001189.2-201ENST00000527320 189 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
PRAMEP78395 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.36□□□□□ -1.71
PRAMEP78395 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.36□□□□□ -1.71
PRAMEP78395 AP001180.3-201ENST00000582221 145 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.36□□□□□ -1.71
PRAMEP78395 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.36□□□□□ -1.71
PRAMEP78395 RPL12P25-202ENST00000598100 674 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 AC008638.3-201ENST00000603341 463 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 AC010680.4-201ENST00000605334 543 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 AC069545.1-201ENST00000605671 358 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 OR6R2P-201ENST00000609216 300 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 AC013470.4-201ENST00000619978 986 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 AC009452.1-201ENST00000640823 606 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.36□□□□□ -1.71
PRAMEP78395 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
PRAMEP78395 DBF4P1-201ENST00000412976 1892 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRAMEP78395 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRAMEP78395 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.36□□□□□ -1.71
PRAMEP78395 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.36□□□□□ -1.71
PRAMEP78395 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRAMEP78395 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PRAMEP78395 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRAMEP78395 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PRAMEP78395 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.35□□□□□ -1.71
PRAMEP78395 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PRAMEP78395 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.35□□□□□ -1.71
PRAMEP78395 OR5P1P-201ENST00000299512 925 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 RNU6-251P-201ENST00000363235 104 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 RNA5SP175-201ENST00000364275 119 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 RNA5SP513-201ENST00000364648 118 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 RNU6-398P-201ENST00000384143 109 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 MIR513A2-201ENST00000385249 127 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 RNA5SP332-201ENST00000391063 115 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 ERHP2-201ENST00000402323 299 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PRAMEP78395 RPS23P10-201ENST00000416185 486 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 RPS3AP9-201ENST00000417027 792 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 AC004552.1-201ENST00000419089 348 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.35□□□□□ -1.71
PRAMEP78395 MRPS36P1-201ENST00000421291 307 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 AL356387.2-201ENST00000422272 243 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.35□□□□□ -1.71
PRAMEP78395 RPL23AP1-201ENST00000428990 471 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 PSMA2P3-201ENST00000429685 675 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 AL138878.2-201ENST00000440581 1241 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 RPL23AP76-201ENST00000441860 458 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 AC007327.1-201ENST00000447461 264 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.35□□□□□ -1.71
PRAMEP78395 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.35□□□□□ -1.71
PRAMEP78395 RPS26P3-201ENST00000470205 348 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 AC011979.1-201ENST00000472300 483 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 AC090543.2-201ENST00000483963 348 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 AC004057.1-201ENST00000485827 348 ntBASIC4.35□□□□□ -1.71
PRAMEP78395 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 236 ms