Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 USP9YP25-201ENST00000457708 443 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.6□□□□□ -1.67
HDAC4P56524 GAPDHP39-201ENST00000481866 979 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AC012158.1-204ENST00000483430 465 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AC091951.3-201ENST00000504093 246 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.6□□□□□ -1.67
HDAC4P56524 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.6□□□□□ -1.67
HDAC4P56524 AC119751.5-201ENST00000514077 770 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.6□□□□□ -1.67
HDAC4P56524 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.6□□□□□ -1.67
HDAC4P56524 DUXAP6-201ENST00000553858 601 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AC068831.4-201ENST00000556118 109 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 VN1R78P-201ENST00000597393 564 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AC008751.2-201ENST00000597885 980 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AL139395.1-201ENST00000603662 160 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AC231759.1-201ENST00000616455 597 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AC006338.2-201ENST00000616864 791 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AP000484.1-201ENST00000620067 1252 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 AC000123.2-201ENST00000623124 461 ntBASIC4.6□□□□□ -1.67
HDAC4P56524 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.6□□□□□ -1.67
HDAC4P56524 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.6□□□□□ -1.67
HDAC4P56524 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HDAC4P56524 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HDAC4P56524 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.6□□□□□ -1.67
HDAC4P56524 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HDAC4P56524 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC4P56524 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC4P56524 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HDAC4P56524 MFSD8-242ENST00000641690 4199 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.59□□□□□ -1.67
HDAC4P56524 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
HDAC4P56524 AL512646.1-201ENST00000269395 1077 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HDAC4P56524 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
HDAC4P56524 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HDAC4P56524 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HDAC4P56524 RNA5SP391-201ENST00000363456 119 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 RN7SKP44-201ENST00000363602 316 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 RN7SKP227-201ENST00000364445 330 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 RNA5SP22-201ENST00000365393 109 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
HDAC4P56524 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
HDAC4P56524 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HDAC4P56524 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HDAC4P56524 MIR3065-201ENST00000390137 79 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 ZNF876P-202ENST00000398732 1485 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.59□□□□□ -1.67
HDAC4P56524 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.59□□□□□ -1.67
HDAC4P56524 RPS20P14-201ENST00000412545 360 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.59□□□□□ -1.67
HDAC4P56524 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.59□□□□□ -1.67
HDAC4P56524 CYP4F29P-201ENST00000420685 446 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.59□□□□□ -1.67
HDAC4P56524 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HDAC4P56524 CENPIP1-201ENST00000425713 902 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.59□□□□□ -1.67
HDAC4P56524 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.59□□□□□ -1.67
HDAC4P56524 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.59□□□□□ -1.67
HDAC4P56524 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.59□□□□□ -1.67
HDAC4P56524 VN1R32P-201ENST00000452234 905 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 AC103987.1-201ENST00000473394 348 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.59□□□□□ -1.67
HDAC4P56524 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.59□□□□□ -1.67
HDAC4P56524 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.59□□□□□ -1.67
HDAC4P56524 MTATP6P22-201ENST00000507369 598 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 AC113347.3-201ENST00000509113 148 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.59□□□□□ -1.67
HDAC4P56524 AC008885.2-201ENST00000509506 930 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.59□□□□□ -1.67
HDAC4P56524 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.59□□□□□ -1.67
HDAC4P56524 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.59□□□□□ -1.67
HDAC4P56524 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.59□□□□□ -1.67
HDAC4P56524 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
HDAC4P56524 AC092747.2-201ENST00000545069 983 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 BNIP3P5-201ENST00000562290 498 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 MIR4715-201ENST00000584117 79 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 AC061975.8-201ENST00000587058 721 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 AC008759.1-201ENST00000589783 983 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 BNIP3P22-201ENST00000593399 556 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.59□□□□□ -1.67
HDAC4P56524 AC068790.4-201ENST00000602474 263 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 AC079587.1-201ENST00000603846 277 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 AC021749.1-201ENST00000604322 607 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HDAC4P56524 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HDAC4P56524 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HDAC4P56524 CU459211.1-201ENST00000635667 749 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 MTND2P41-201ENST00000637599 773 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 MFSD8-245ENST00000641743 948 ntBASIC4.59□□□□□ -1.67
HDAC4P56524 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HDAC4P56524 AC022893.2-201ENST00000564832 3296 ntBASIC4.59□□□□□ -1.68
HDAC4P56524 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
HDAC4P56524 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HDAC4P56524 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HDAC4P56524 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HDAC4P56524 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HDAC4P56524 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HDAC4P56524 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HDAC4P56524 RPL32P3-201ENST00000359025 275 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 RNU6-707P-201ENST00000364647 95 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms