Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 NDUFA5P9-201ENST00000472609 340 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 AC108729.2-201ENST00000476543 840 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 OR52A4P-202ENST00000481634 799 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 RPS3AP6-201ENST00000484430 795 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 TRBV12-2-201ENST00000489763 344 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.36□□□□□ -1.87
CX3CR1P49238 AC026979.1-201ENST00000492525 396 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 NIPA2P2-201ENST00000496376 1083 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 AC068305.1-201ENST00000497406 726 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 AC078918.1-201ENST00000498515 228 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.36□□□□□ -1.87
CX3CR1P49238 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.36□□□□□ -1.87
CX3CR1P49238 AC005921.1-201ENST00000510589 286 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.36□□□□□ -1.87
CX3CR1P49238 NDUFA5P2-201ENST00000519723 344 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 AC104115.2-201ENST00000523026 687 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.36□□□□□ -1.87
CX3CR1P49238 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.36□□□□□ -1.87
CX3CR1P49238 AP003717.3-201ENST00000544832 1180 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.36□□□□□ -1.87
CX3CR1P49238 AL592436.1-201ENST00000605135 558 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 OR2BH1P-201ENST00000608850 864 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 AP001033.2-201ENST00000609701 1003 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.36□□□□□ -1.87
CX3CR1P49238 MIR6758-201ENST00000620653 63 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 MIR6500-201ENST00000622700 86 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 AL590396.2-201ENST00000636511 1041 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 AC017104.5-201ENST00000637647 639 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CX3CR1P49238 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CX3CR1P49238 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CX3CR1P49238 AL157700.1-201ENST00000561973 1432 ntBASIC3.36□□□□□ -1.87
CX3CR1P49238 AC006504.1-201ENST00000562493 3666 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 MTND5P11-201ENST00000511037 1812 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CR1P49238 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
CX3CR1P49238 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CR1P49238 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CR1P49238 AC126755.2-208ENST00000327792 462 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 AC138969.1-213ENST00000331436 462 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 RPL32P3-201ENST00000359025 275 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 RNA5SP443-201ENST00000363083 132 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 RNA5SP27-201ENST00000363839 119 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CR1P49238 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.35□□□□□ -1.87
CX3CR1P49238 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.35□□□□□ -1.87
CX3CR1P49238 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.35□□□□□ -1.87
CX3CR1P49238 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.35□□□□□ -1.87
CX3CR1P49238 AL513175.1-201ENST00000431492 780 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.35□□□□□ -1.87
CX3CR1P49238 SKP1P1-201ENST00000438081 489 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.35□□□□□ -1.87
CX3CR1P49238 AC084198.1-201ENST00000477747 402 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 RPS4XP15-201ENST00000489210 795 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 AP001086.1-201ENST00000494882 321 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.35□□□□□ -1.87
CX3CR1P49238 HPRT1P1-201ENST00000509498 657 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 AC008885.2-201ENST00000509506 930 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 RN7SKP122-201ENST00000515923 296 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.35□□□□□ -1.87
CX3CR1P49238 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.35□□□□□ -1.87
CX3CR1P49238 SUMO2P20-201ENST00000520803 283 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.35□□□□□ -1.87
CX3CR1P49238 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CR1P49238 OR5D17P-201ENST00000531492 978 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.35□□□□□ -1.87
CX3CR1P49238 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.35□□□□□ -1.87
CX3CR1P49238 AGGF1P8-201ENST00000562979 1000 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.35□□□□□ -1.87
CX3CR1P49238 AC099489.2-201ENST00000574976 260 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.35□□□□□ -1.87
CX3CR1P49238 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.35□□□□□ -1.87
CX3CR1P49238 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.35□□□□□ -1.87
CX3CR1P49238 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.35□□□□□ -1.87
CX3CR1P49238 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.35□□□□□ -1.87
CX3CR1P49238 AC040174.2-201ENST00000602701 465 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 AL137849.1-201ENST00000604767 169 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 AC018754.1-201ENST00000607486 925 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 AL118556.2-201ENST00000614375 824 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 AC006338.2-201ENST00000616864 791 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 AL118508.4-201ENST00000624142 1176 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 MIR4278-201ENST00000636094 69 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CR1P49238 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CR1P49238 PRO1804-201ENST00000623780 2050 ntBASIC3.35□□□□□ -1.87
CX3CR1P49238 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CR1P49238 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CR1P49238 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
CX3CR1P49238 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.34□□□□□ -1.87
CX3CR1P49238 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.34□□□□□ -1.87
CX3CR1P49238 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CX3CR1P49238 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.34□□□□□ -1.87
CX3CR1P49238 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CX3CR1P49238 RNU6-1243P-201ENST00000364028 107 ntBASIC3.34□□□□□ -1.87
CX3CR1P49238 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.34□□□□□ -1.87
CX3CR1P49238 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms