Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
ATRXP46100 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.55□□□□□ -1.84
ATRXP46100 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
ATRXP46100 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ATRXP46100 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ATRXP46100 RNU6-468P-201ENST00000384003 109 ntBASIC3.55□□□□□ -1.84
ATRXP46100 AL592291.1-201ENST00000403830 352 ntBASIC3.55□□□□□ -1.84
ATRXP46100 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.55□□□□□ -1.84
ATRXP46100 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.55□□□□□ -1.84
ATRXP46100 AL445528.1-201ENST00000426330 420 ntBASIC3.55□□□□□ -1.84
ATRXP46100 AL358472.1-201ENST00000431295 329 ntBASIC3.55□□□□□ -1.84
ATRXP46100 AF228730.2-201ENST00000438784 848 ntBASIC3.55□□□□□ -1.84
ATRXP46100 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.55□□□□□ -1.84
ATRXP46100 MED6P1-201ENST00000439659 713 ntBASIC3.55□□□□□ -1.84
ATRXP46100 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.55□□□□□ -1.84
ATRXP46100 CR769776.1-201ENST00000441254 787 ntBASIC3.55□□□□□ -1.84
ATRXP46100 RPL7P36-201ENST00000444633 681 ntBASIC3.55□□□□□ -1.84
ATRXP46100 AC245517.4-201ENST00000448601 281 ntBASIC3.55□□□□□ -1.84
ATRXP46100 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.55□□□□□ -1.84
ATRXP46100 AC008280.2-201ENST00000455473 307 ntBASIC3.55□□□□□ -1.84
ATRXP46100 AC096992.1-201ENST00000459808 709 ntBASIC3.55□□□□□ -1.84
ATRXP46100 TRBV12-1-201ENST00000479785 344 ntBASIC3.55□□□□□ -1.84
ATRXP46100 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.55□□□□□ -1.84
ATRXP46100 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.55□□□□□ -1.84
ATRXP46100 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.55□□□□□ -1.84
ATRXP46100 AC091515.1-201ENST00000548110 679 ntBASIC3.55□□□□□ -1.84
ATRXP46100 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.55□□□□□ -1.84
ATRXP46100 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.55□□□□□ -1.84
ATRXP46100 AL109741.3-201ENST00000561748 592 ntBASIC3.55□□□□□ -1.84
ATRXP46100 MIR4425-201ENST00000580572 84 ntBASIC3.55□□□□□ -1.84
ATRXP46100 AC140725.3-201ENST00000616193 880 ntBASIC3.55□□□□□ -1.84
ATRXP46100 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ATRXP46100 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
ATRXP46100 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ATRXP46100 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC3.55□□□□□ -1.84
ATRXP46100 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
ATRXP46100 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
ATRXP46100 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATRXP46100 RNA5SP97-201ENST00000365006 84 ntBASIC3.54□□□□□ -1.84
ATRXP46100 NPM1P37-201ENST00000403105 874 ntBASIC3.54□□□□□ -1.84
ATRXP46100 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.54□□□□□ -1.84
ATRXP46100 AC241520.1-201ENST00000422654 1099 ntBASIC3.54□□□□□ -1.84
ATRXP46100 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.54□□□□□ -1.84
ATRXP46100 RPS26P4-201ENST00000431743 355 ntBASIC3.54□□□□□ -1.84
ATRXP46100 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.54□□□□□ -1.84
ATRXP46100 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.54□□□□□ -1.84
ATRXP46100 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.54□□□□□ -1.84
ATRXP46100 RPL7P1-201ENST00000468161 747 ntBASIC3.54□□□□□ -1.84
ATRXP46100 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ATRXP46100 RPS17P11-201ENST00000474297 293 ntBASIC3.54□□□□□ -1.84
ATRXP46100 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.54□□□□□ -1.84
ATRXP46100 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC3.54□□□□□ -1.84
ATRXP46100 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.54□□□□□ -1.84
ATRXP46100 AC008088.1-201ENST00000580993 280 ntBASIC3.54□□□□□ -1.84
ATRXP46100 AC067852.4-201ENST00000590314 478 ntBASIC3.54□□□□□ -1.84
ATRXP46100 AC069431.2-201ENST00000604149 1099 ntBASIC3.54□□□□□ -1.84
ATRXP46100 AC008966.2-201ENST00000606157 453 ntBASIC3.54□□□□□ -1.84
ATRXP46100 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.54□□□□□ -1.84
ATRXP46100 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.54□□□□□ -1.84
ATRXP46100 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.54□□□□□ -1.84
ATRXP46100 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.54□□□□□ -1.84
ATRXP46100 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATRXP46100 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ATRXP46100 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.54□□□□□ -1.84
ATRXP46100 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ATRXP46100 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ATRXP46100 RNA5SP235-201ENST00000365411 114 ntBASIC3.54□□□□□ -1.84
ATRXP46100 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.54□□□□□ -1.84
ATRXP46100 HSFY3P-201ENST00000444242 1191 ntBASIC3.54□□□□□ -1.84
ATRXP46100 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.54□□□□□ -1.84
ATRXP46100 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.54□□□□□ -1.84
ATRXP46100 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC3.54□□□□□ -1.84
ATRXP46100 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.54□□□□□ -1.84
ATRXP46100 RNU2-27P-201ENST00000516185 142 ntBASIC3.54□□□□□ -1.84
ATRXP46100 SEC11B-201ENST00000518383 499 ntBASIC3.54□□□□□ -1.84
ATRXP46100 HAUS1P3-201ENST00000523909 662 ntBASIC3.54□□□□□ -1.84
ATRXP46100 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.54□□□□□ -1.84
ATRXP46100 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.54□□□□□ -1.84
ATRXP46100 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.54□□□□□ -1.84
ATRXP46100 MIR4509-3-201ENST00000578671 94 ntBASIC3.54□□□□□ -1.84
ATRXP46100 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.54□□□□□ -1.84
ATRXP46100 MIR4509-2-201ENST00000583920 94 ntBASIC3.54□□□□□ -1.84
ATRXP46100 MIR4509-1-201ENST00000618224 94 ntBASIC3.54□□□□□ -1.84
ATRXP46100 AC139792.2-201ENST00000624218 587 ntBASIC3.54□□□□□ -1.84
ATRXP46100 AC119674.1-207ENST00000641355 633 ntBASIC3.54□□□□□ -1.84
ATRXP46100 AL136360.1-201ENST00000503377 1900 ntBASIC3.54□□□□□ -1.84
ATRXP46100 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.54□□□□□ -1.84
ATRXP46100 AL669831.5-218ENST00000591702 1873 ntBASIC3.54□□□□□ -1.84
ATRXP46100 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.54□□□□□ -1.84
ATRXP46100 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.54□□□□□ -1.84
ATRXP46100 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ATRXP46100 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATRXP46100 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ATRXP46100 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
ATRXP46100 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATRXP46100 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ATRXP46100 MIR16-2-201ENST00000362117 81 ntBASIC3.53□□□□□ -1.84
ATRXP46100 RNA5SP50-201ENST00000363731 107 ntBASIC3.53□□□□□ -1.84
ATRXP46100 XGY1-201ENST00000381172 446 ntBASIC3.53□□□□□ -1.84
ATRXP46100 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms