Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC010857.1-201ENST00000606398 594 ntBASIC3.1□□□□□ -1.91
HLA-DQB1P01920 AC110792.4-201ENST00000609843 298 ntBASIC3.1□□□□□ -1.91
HLA-DQB1P01920 AC023043.4-201ENST00000612081 449 ntBASIC3.1□□□□□ -1.91
HLA-DQB1P01920 AC107308.1-201ENST00000615897 301 ntBASIC3.1□□□□□ -1.91
HLA-DQB1P01920 AC015726.3-201ENST00000624501 418 ntBASIC3.1□□□□□ -1.91
HLA-DQB1P01920 AP003072.4-201ENST00000624580 310 ntBASIC3.1□□□□□ -1.91
HLA-DQB1P01920 MIR492-201ENST00000638676 116 ntBASIC3.1□□□□□ -1.91
HLA-DQB1P01920 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DQB1P01920 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DQB1P01920 SRP72P2-201ENST00000344851 1979 ntBASIC3.1□□□□□ -1.91
HLA-DQB1P01920 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DQB1P01920 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DQB1P01920 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DQB1P01920 RNF6P1-201ENST00000444889 1784 ntBASIC3.1□□□□□ -1.91
HLA-DQB1P01920 AL118496.1-201ENST00000440201 1812 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 RNU6-252P-201ENST00000363232 107 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 RNU1-32P-201ENST00000363937 159 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 PTMAP5-201ENST00000393073 333 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 MTCO3P4-201ENST00000419236 787 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 FAM204CP-201ENST00000424489 642 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 RPS24P8-201ENST00000431490 402 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AC009969.1-201ENST00000438726 172 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 CEACAMP9-201ENST00000442990 513 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 MTND2P6-201ENST00000455337 1030 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 HMGN2P7-201ENST00000456186 273 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 UBDP1-202ENST00000457888 382 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AC006463.2-201ENST00000473326 348 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 RPS4XP15-201ENST00000489210 795 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 SNORA31.9-201ENST00000516429 84 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AC103833.1-201ENST00000517442 172 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AC004923.2-201ENST00000529649 369 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AC025884.1-201ENST00000556034 378 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AL121594.4-201ENST00000556211 1196 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 MIR4458-201ENST00000578872 75 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 ZNF92P3-201ENST00000596594 954 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AC011374.2-201ENST00000607135 526 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 MIR6867-201ENST00000610636 67 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AL713922.2-201ENST00000619384 716 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AC090617.9-201ENST00000623751 147 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AC112484.5-201ENST00000624189 228 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 AC116563.2-201ENST00000624751 535 ntBASIC3.09□□□□□ -1.91
HLA-DQB1P01920 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQB1P01920 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
HLA-DQB1P01920 GTF2H2B-203ENST00000508065 1432 ntBASIC3.09□□□□□ -1.92
HLA-DQB1P01920 ZNF90P1-201ENST00000480493 1951 ntBASIC3.09□□□□□ -1.92
HLA-DQB1P01920 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.09□□□□□ -1.92
HLA-DQB1P01920 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
HLA-DQB1P01920 AL353743.4-201ENST00000422653 1547 ntBASIC3.09□□□□□ -1.92
HLA-DQB1P01920 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HLA-DQB1P01920 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.08□□□□□ -1.92
HLA-DQB1P01920 TAF9BP2-201ENST00000400856 499 ntBASIC3.08□□□□□ -1.92
HLA-DQB1P01920 LINC01347-201ENST00000417964 355 ntBASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AC009965.2-201ENST00000425328 970 ntBASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AC105402.2-201ENST00000438503 358 ntBASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 CYCSP53-201ENST00000455540 265 ntBASIC3.08□□□□□ -1.92
HLA-DQB1P01920 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 SNORA31.13-201ENST00000516624 135 ntBASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AL161713.1-201ENST00000555538 145 ntBASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AC023575.1-201ENST00000580510 358 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms