Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
UPK1AO00322 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
UPK1AO00322 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UPK1AO00322 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.32□□□□□ -1.88
UPK1AO00322 AC017079.2-201ENST00000416102 485 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 PTP4A1P5-201ENST00000420305 455 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 RPS15AP6-201ENST00000420703 385 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.32□□□□□ -1.88
UPK1AO00322 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.32□□□□□ -1.88
UPK1AO00322 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.32□□□□□ -1.88
UPK1AO00322 USP9YP7-201ENST00000436723 430 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 AL031663.1-201ENST00000437445 219 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
UPK1AO00322 XKRYP6-201ENST00000440468 1116 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 Z99127.2-201ENST00000441426 334 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 RRM2P4-201ENST00000441721 562 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 XKRYP3-201ENST00000442113 1116 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.32□□□□□ -1.88
UPK1AO00322 USP9YP32-201ENST00000452432 430 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.32□□□□□ -1.88
UPK1AO00322 AP002345.1-201ENST00000456493 928 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 TRBV8-2-201ENST00000475637 270 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 ACTR3P3-201ENST00000480448 893 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 SETP14-201ENST00000497538 873 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 NDUFB4P9-201ENST00000511646 388 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.32□□□□□ -1.88
UPK1AO00322 AC016550.3-201ENST00000515706 767 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 RNU6-491P-201ENST00000516099 110 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 RNU2-27P-201ENST00000516185 142 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 RNA5SP309-201ENST00000516670 106 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 SNORA70.18-201ENST00000516696 98 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.32□□□□□ -1.88
UPK1AO00322 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.32□□□□□ -1.88
UPK1AO00322 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.32□□□□□ -1.88
UPK1AO00322 BNIP3P5-201ENST00000562290 498 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 MIR3186-201ENST00000577404 85 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 AC020914.6-201ENST00000594327 272 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 AC009948.4-201ENST00000604692 675 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 AL355816.1-201ENST00000607951 118 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 AC103710.3-201ENST00000608157 948 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.32□□□□□ -1.88
UPK1AO00322 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.32□□□□□ -1.88
UPK1AO00322 AC243654.2-201ENST00000612843 443 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 AP003355.3-201ENST00000623465 114 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 AC015726.3-201ENST00000624501 418 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 AC119674.1-220ENST00000641502 1048 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.32□□□□□ -1.88
UPK1AO00322 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.32□□□□□ -1.88
UPK1AO00322 AC090337.1-201ENST00000579651 2074 ntBASIC3.32□□□□□ -1.88
UPK1AO00322 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.32□□□□□ -1.88
UPK1AO00322 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UPK1AO00322 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.32□□□□□ -1.88
UPK1AO00322 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UPK1AO00322 USP8P1-201ENST00000494673 3183 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
UPK1AO00322 RNA5SP124-201ENST00000362739 110 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 RNU1-64P-201ENST00000365443 163 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 SNORD6-201ENST00000365444 73 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 AC136624.1-201ENST00000400791 413 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 AL445189.1-201ENST00000405722 338 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 RN7SKP53-201ENST00000411337 315 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 AC105402.1-201ENST00000413336 545 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.31□□□□□ -1.88
UPK1AO00322 DBIP2-201ENST00000419076 262 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 AL356806.1-201ENST00000422524 916 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.31□□□□□ -1.88
UPK1AO00322 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.31□□□□□ -1.88
UPK1AO00322 AL035246.1-201ENST00000433554 1255 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 ELOCP3-201ENST00000439303 348 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 AL606490.8-201ENST00000441624 319 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UPK1AO00322 MORF4L1P4-201ENST00000450245 976 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.31□□□□□ -1.88
UPK1AO00322 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.31□□□□□ -1.88
UPK1AO00322 RPL23AP62-201ENST00000463396 453 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 AC018635.1-201ENST00000468292 1030 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 RN7SL594P-201ENST00000470590 287 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 RPS4XP22-201ENST00000480755 780 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 AP000563.1-201ENST00000490865 758 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.31□□□□□ -1.88
UPK1AO00322 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.31□□□□□ -1.88
UPK1AO00322 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.31□□□□□ -1.88
UPK1AO00322 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 AC104997.1-201ENST00000519761 717 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.31□□□□□ -1.88
UPK1AO00322 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.31□□□□□ -1.88
UPK1AO00322 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UPK1AO00322 AC006518.1-201ENST00000541449 943 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.31□□□□□ -1.88
UPK1AO00322 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.31□□□□□ -1.88
UPK1AO00322 MIR5047-201ENST00000579212 100 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 AC093227.2-201ENST00000589357 285 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 AC112230.1-201ENST00000604342 547 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 AC012557.1-201ENST00000607115 611 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 AC135803.1-201ENST00000608748 565 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 AC239803.2-201ENST00000610161 430 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 C2orf27A-204ENST00000623058 969 ntBASIC3.31□□□□□ -1.88
UPK1AO00322 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.31□□□□□ -1.88
UPK1AO00322 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms