Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 ATP5G1P3-201ENST00000463301 410 ntBASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 RN7SL41P-201ENST00000476144 297 ntBASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 GAPDHP39-201ENST00000481866 979 ntBASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 RPS4XP18-201ENST00000495480 763 ntBASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 SNORA70.14-201ENST00000516205 110 ntBASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 GLRXP2-201ENST00000555594 321 ntBASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 AC093519.1-201ENST00000566109 298 ntBASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 IPO5P1-202ENST00000600039 287 ntBASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 AL590282.1-201ENST00000610379 1136 ntBASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 FAM27D1-201ENST00000612308 341 ntBASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 AC004925.1-201ENST00000624256 2706 ntBASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 AC098679.5-201ENST00000624394 571 ntBASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 ZNF663P-202ENST00000641770 1131 ntBASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CHMP4AQ9BY43 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 RNA5SP151-201ENST00000365632 117 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 GSTA8P-201ENST00000404253 637 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 TAF13P2-201ENST00000416876 286 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 AIMP1P1-201ENST00000418670 937 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 AC009237.2-201ENST00000421358 284 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 HSFY1P1-201ENST00000423928 1178 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 MTCYBP15-201ENST00000433123 1127 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 AC241584.1-201ENST00000438469 1241 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 ARL4AP3-201ENST00000441452 574 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 SNRPGP3-201ENST00000469405 227 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 AC091167.1-201ENST00000492017 396 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 RN7SKP122-201ENST00000515923 296 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 AC109635.4-202ENST00000531666 412 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 AC087894.1-201ENST00000538359 518 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 PARP1P2-201ENST00000556806 195 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 AC005412.1-201ENST00000580812 1049 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 AC010201.1-201ENST00000605051 540 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 HSPE1P14-201ENST00000605812 302 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 VIS1.1-201ENST00000610517 203 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 AL354976.1-201ENST00000613843 387 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 MIR3653-201ENST00000625572 110 ntBASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP4AQ9BY43 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 RNA5SP28-201ENST00000363841 119 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 RPL22P22-201ENST00000395439 379 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 AL161909.1-201ENST00000397390 712 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 RPS20P14-201ENST00000412545 360 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 RAC1P3-201ENST00000416129 580 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 CHIAP3-201ENST00000423668 1133 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 NDUFA5P7-201ENST00000452914 242 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 AC098799.1-201ENST00000504752 800 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 BOLA3P3-201ENST00000505182 232 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 MTCYBP27-201ENST00000555160 670 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 AC103710.3-201ENST00000608157 948 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 AL445423.1-201ENST00000609941 536 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 AC005962.2-201ENST00000611427 652 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 MIR6798-201ENST00000612887 67 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 AC114781.5-201ENST00000615297 108 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 AC009237.17-201ENST00000618111 748 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 AC006249.1-201ENST00000621223 471 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 AC011944.2-201ENST00000624440 683 ntBASIC5.59□□□□□ -1.51
CHMP4AQ9BY43 AC092184.1-201ENST00000625042 715 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms