Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC008802.1-201ENST00000519121 791 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX18Q96RF0 SERPINE4P-201ENST00000554978 281 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC087241.4-201ENST00000612441 480 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 Z99129.1-201ENST00000612510 255 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC008498.1-201ENST00000613012 531 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 SNX18P1Y-201ENST00000616231 511 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 AL160394.1-201ENST00000624765 724 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 OR52B5P-202ENST00000641118 1110 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX18Q96RF0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SNX18Q96RF0 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC011493.1-201ENST00000596753 1632 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 KPNA2P2-201ENST00000419546 1489 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX18Q96RF0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 Y_RNA.41-201ENST00000362646 102 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 RNU6-216P-201ENST00000363282 104 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 RNA5SP88-201ENST00000365560 109 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 SNORA2.3-201ENST00000383920 135 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 RNU6-1122P-201ENST00000384449 107 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AP000580.1-201ENST00000404439 358 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNX18Q96RF0 PRELID3BP11-201ENST00000414230 479 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 ATG4AP1-201ENST00000416893 538 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 RBMY2KP-201ENST00000418221 992 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC092647.1-201ENST00000420654 287 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC009237.2-201ENST00000421358 284 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 EIF4EP1-201ENST00000422311 642 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 EI24P4-201ENST00000423683 1078 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 UBE2V1P3-201ENST00000439651 417 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC093899.1-201ENST00000457984 376 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC006511.1-201ENST00000470614 315 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC104763.1-201ENST00000475274 360 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 SNX5P1-201ENST00000505757 1041 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC109927.2-201ENST00000506416 303 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 RPS27AP18-201ENST00000515536 459 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 RNA5SP249-201ENST00000516127 99 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 RNU6-405P-201ENST00000516637 110 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 DUXAP2-201ENST00000519198 589 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 MIR3691-201ENST00000578066 90 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 RBM11P1-201ENST00000604951 799 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC090186.1-201ENST00000605991 572 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AL445222.1-201ENST00000607259 628 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC091979.2-201ENST00000607514 214 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC116651.1-201ENST00000609724 556 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC067931.1-201ENST00000624190 671 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC079228.1-201ENST00000624774 1049 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC068137.3-201ENST00000639191 341 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC073869.6-201ENST00000640656 341 ntBASIC4.57□□□□□ -1.68
SNX18Q96RF0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SNX18Q96RF0 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX18Q96RF0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX18Q96RF0 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX18Q96RF0 AL079343.1-201ENST00000572358 1771 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 USP9YP4-201ENST00000424401 1745 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX18Q96RF0 OR10J6P-201ENST00000289731 930 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX18Q96RF0 RNU5F-7P-201ENST00000363696 115 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 SNORA68.2-201ENST00000391263 128 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 PRRC2CP1-201ENST00000404428 159 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 MTCO3P31-201ENST00000405526 789 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 NCSTNP1-201ENST00000406229 144 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms