Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ZNF962P-201ENST00000443465 3140 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 CR788268.1-201ENST00000603931 1809 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SCN1BQ07699 SUGT1P1-201ENST00000379514 476 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 RNU6-730P-201ENST00000383954 104 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 MIR3074-201ENST00000384885 81 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 RNU6-837P-201ENST00000391056 108 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 MTND4LP20-201ENST00000402379 270 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 SPTLC1P2-201ENST00000407089 121 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN1BQ07699 COX6B1P1-201ENST00000415962 213 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 P2RY10P2-201ENST00000416730 913 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 AL645608.4-201ENST00000423619 154 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.94□□□□□ -1.78
SCN1BQ07699 HIGD1AP12-201ENST00000427832 281 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.94□□□□□ -1.78
SCN1BQ07699 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN1BQ07699 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.94□□□□□ -1.78
SCN1BQ07699 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SCN1BQ07699 HMGB3P22-202ENST00000451823 572 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 VN1R32P-201ENST00000452234 905 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 RPL9P32-201ENST00000464118 620 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 PLGLA-201ENST00000465668 449 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 RPS4XP14-201ENST00000493072 781 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 RPL23AP55-201ENST00000498163 452 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 AC108078.3-201ENST00000502633 489 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN1BQ07699 AC010374.2-201ENST00000512933 535 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 AP001189.2-201ENST00000527320 189 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 OR5D17P-201ENST00000531492 978 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 AC090502.2-201ENST00000549267 280 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN1BQ07699 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.94□□□□□ -1.78
SCN1BQ07699 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN1BQ07699 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN1BQ07699 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.94□□□□□ -1.78
SCN1BQ07699 RN7SL753P-201ENST00000581238 290 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN1BQ07699 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.94□□□□□ -1.78
SCN1BQ07699 AC007687.1-201ENST00000602704 304 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 AC069431.2-201ENST00000604149 1099 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 AC124312.4-201ENST00000605533 310 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 AC091946.2-201ENST00000606105 291 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 AL121652.1-201ENST00000608851 448 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN1BQ07699 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.94□□□□□ -1.78
SCN1BQ07699 AC016769.4-201ENST00000616893 535 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 AC112694.2-201ENST00000623697 768 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.94□□□□□ -1.78
SCN1BQ07699 NXPH1-205ENST00000602349 1953 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCN1BQ07699 AP005901.5-201ENST00000545779 1796 ntBASIC3.94□□□□□ -1.78
SCN1BQ07699 AC108467.2-201ENST00000617640 1597 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.93□□□□□ -1.78
SCN1BQ07699 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN1BQ07699 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SCN1BQ07699 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SCN1BQ07699 AC103591.2-201ENST00000265259 766 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SCN1BQ07699 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SCN1BQ07699 RNU6-600P-201ENST00000362524 99 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 RNU5E-10P-201ENST00000363506 118 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 SNORA7.2-201ENST00000364446 145 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 RNU6-629P-201ENST00000384061 103 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 SNORA51.8-201ENST00000384234 132 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 Z98745.1-201ENST00000402553 494 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 AL024474.1-201ENST00000404655 591 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 AL138880.1-201ENST00000405824 642 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 AL583834.1-201ENST00000406943 343 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SCN1BQ07699 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN1BQ07699 OSTCP5-201ENST00000425293 453 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.93□□□□□ -1.78
SCN1BQ07699 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.93□□□□□ -1.78
SCN1BQ07699 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN1BQ07699 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.93□□□□□ -1.78
SCN1BQ07699 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN1BQ07699 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN1BQ07699 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.93□□□□□ -1.78
SCN1BQ07699 AC063943.1-201ENST00000465434 453 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 RN7SL585P-201ENST00000470538 280 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SCN1BQ07699 PRELID3BP6-201ENST00000503839 571 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 AC093767.1-201ENST00000504523 156 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 AC020593.1-201ENST00000507399 299 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN1BQ07699 RN7SKP276-201ENST00000516242 268 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 AC027309.2-201ENST00000520566 192 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN1BQ07699 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.93□□□□□ -1.78
SCN1BQ07699 AC008127.2-201ENST00000549925 1075 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 EDDM3DP-201ENST00000554692 434 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.93□□□□□ -1.78
SCN1BQ07699 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN1BQ07699 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN1BQ07699 BNIP3P32-201ENST00000600015 554 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms