Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.09□□□□□ -2.07
RPS28P62857 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RPS28P62857 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.09□□□□□ -2.07
RPS28P62857 AC025768.1-201ENST00000510057 267 ntBASIC2.09□□□□□ -2.07
RPS28P62857 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.09□□□□□ -2.07
RPS28P62857 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS28P62857 RNU7-143P-201ENST00000516781 65 ntBASIC2.09□□□□□ -2.07
RPS28P62857 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.09□□□□□ -2.07
RPS28P62857 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS28P62857 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.09□□□□□ -2.07
RPS28P62857 SNRPGP16-201ENST00000533275 226 ntBASIC2.09□□□□□ -2.07
RPS28P62857 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS28P62857 CR383656.14-201ENST00000551951 406 ntBASIC2.09□□□□□ -2.07
RPS28P62857 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC2.09□□□□□ -2.07
RPS28P62857 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS28P62857 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS28P62857 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS28P62857 AC008687.2-201ENST00000597865 520 ntBASIC2.09□□□□□ -2.07
RPS28P62857 AC024153.1-201ENST00000603103 365 ntBASIC2.09□□□□□ -2.07
RPS28P62857 AC024085.1-201ENST00000604299 432 ntBASIC2.09□□□□□ -2.07
RPS28P62857 BNIP3P7-201ENST00000605641 516 ntBASIC2.09□□□□□ -2.07
RPS28P62857 AL391497.1-201ENST00000608671 547 ntBASIC2.09□□□□□ -2.07
RPS28P62857 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS28P62857 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.09□□□□□ -2.07
RPS28P62857 MIR6809-201ENST00000612189 116 ntBASIC2.09□□□□□ -2.07
RPS28P62857 FRG2MP-201ENST00000613317 856 ntBASIC2.09□□□□□ -2.07
RPS28P62857 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC2.09□□□□□ -2.07
RPS28P62857 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC2.09□□□□□ -2.07
RPS28P62857 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.09□□□□□ -2.07
RPS28P62857 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC2.09□□□□□ -2.07
RPS28P62857 AC111152.1-202ENST00000635848 339 ntBASIC2.09□□□□□ -2.07
RPS28P62857 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
RPS28P62857 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.08
RPS28P62857 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
RPS28P62857 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.09□□□□□ -2.08
RPS28P62857 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
RPS28P62857 INTS6P1-201ENST00000504674 2530 ntBASIC2.09□□□□□ -2.08
RPS28P62857 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RPS28P62857 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RPS28P62857 RNU6-98P-201ENST00000384173 107 ntBASIC2.08□□□□□ -2.08
RPS28P62857 MIR600-201ENST00000385007 98 ntBASIC2.08□□□□□ -2.08
RPS28P62857 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RPS28P62857 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RPS28P62857 RNU1-149P-201ENST00000390870 161 ntBASIC2.08□□□□□ -2.08
RPS28P62857 DSTNP4-201ENST00000399472 474 ntBASIC2.08□□□□□ -2.08
RPS28P62857 RBMY2KP-201ENST00000418221 992 ntBASIC2.08□□□□□ -2.08
RPS28P62857 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC2.08□□□□□ -2.08
RPS28P62857 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.08□□□□□ -2.08
RPS28P62857 DUTP6-201ENST00000425573 462 ntBASIC2.08□□□□□ -2.08
RPS28P62857 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC2.08□□□□□ -2.08
RPS28P62857 RPL7L1P9-201ENST00000431298 745 ntBASIC2.08□□□□□ -2.08
RPS28P62857 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.08□□□□□ -2.08
RPS28P62857 MRPS18BP2-201ENST00000434310 759 ntBASIC2.08□□□□□ -2.08
RPS28P62857 CR769767.1-201ENST00000436337 346 ntBASIC2.08□□□□□ -2.08
RPS28P62857 YWHAZP8-201ENST00000436935 731 ntBASIC2.08□□□□□ -2.08
RPS28P62857 AL645638.1-201ENST00000440519 361 ntBASIC2.08□□□□□ -2.08
RPS28P62857 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC2.08□□□□□ -2.08
RPS28P62857 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.08□□□□□ -2.08
RPS28P62857 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC2.08□□□□□ -2.08
RPS28P62857 RPL7P45-201ENST00000455851 743 ntBASIC2.08□□□□□ -2.08
RPS28P62857 RPL23AP31-201ENST00000456160 467 ntBASIC2.08□□□□□ -2.08
RPS28P62857 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC2.08□□□□□ -2.08
RPS28P62857 AC133134.1-201ENST00000466800 359 ntBASIC2.08□□□□□ -2.08
RPS28P62857 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.08□□□□□ -2.08
RPS28P62857 SETP11-201ENST00000473027 690 ntBASIC2.08□□□□□ -2.08
RPS28P62857 RNF138P1-201ENST00000502765 546 ntBASIC2.08□□□□□ -2.08
RPS28P62857 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC2.08□□□□□ -2.08
RPS28P62857 HMGB3P3-201ENST00000510526 400 ntBASIC2.08□□□□□ -2.08
RPS28P62857 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.08□□□□□ -2.08
RPS28P62857 AC117525.1-201ENST00000515228 503 ntBASIC2.08□□□□□ -2.08
RPS28P62857 SNORA31.8-201ENST00000516327 108 ntBASIC2.08□□□□□ -2.08
RPS28P62857 HMGB1P41-201ENST00000520234 440 ntBASIC2.08□□□□□ -2.08
RPS28P62857 AP006245.1-201ENST00000522549 120 ntBASIC2.08□□□□□ -2.08
RPS28P62857 SUB1P1-201ENST00000524415 382 ntBASIC2.08□□□□□ -2.08
RPS28P62857 OR4A46P-201ENST00000527255 933 ntBASIC2.08□□□□□ -2.08
RPS28P62857 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.08□□□□□ -2.08
RPS28P62857 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RPS28P62857 AC089984.3-201ENST00000552838 363 ntBASIC2.08□□□□□ -2.08
RPS28P62857 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.08□□□□□ -2.08
RPS28P62857 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.08□□□□□ -2.08
RPS28P62857 ACTR3BP3-201ENST00000565577 979 ntBASIC2.08□□□□□ -2.08
RPS28P62857 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC2.08□□□□□ -2.08
RPS28P62857 MPHOSPH6-207ENST00000569021 392 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RPS28P62857 MYL12BP1-201ENST00000569826 507 ntBASIC2.08□□□□□ -2.08
RPS28P62857 MIR4312-201ENST00000579909 76 ntBASIC2.08□□□□□ -2.08
RPS28P62857 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.08□□□□□ -2.08
RPS28P62857 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC2.08□□□□□ -2.08
RPS28P62857 AC012493.2-201ENST00000595083 291 ntBASIC2.08□□□□□ -2.08
RPS28P62857 AC106900.2-201ENST00000604994 317 ntBASIC2.08□□□□□ -2.08
RPS28P62857 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC2.08□□□□□ -2.08
RPS28P62857 AC006329.2-201ENST00000611491 394 ntBASIC2.08□□□□□ -2.08
RPS28P62857 AL357559.1-201ENST00000622228 274 ntBASIC2.08□□□□□ -2.08
RPS28P62857 AC068880.5-201ENST00000624331 290 ntBASIC2.08□□□□□ -2.08
RPS28P62857 AC006065.6-201ENST00000625201 545 ntBASIC2.08□□□□□ -2.08
RPS28P62857 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
RPS28P62857 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.08□□□□□ -2.08
RPS28P62857 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RPS28P62857 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
RPS28P62857 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.07□□□□□ -2.08
RPS28P62857 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms