Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.23□□□□□ -1.89
LSM6P62312 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LSM6P62312 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.23□□□□□ -1.89
LSM6P62312 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.23□□□□□ -1.89
LSM6P62312 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
LSM6P62312 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM6P62312 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
LSM6P62312 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.22□□□□□ -1.89
LSM6P62312 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
LSM6P62312 OR4A15-201ENST00000314706 1035 ntBASIC3.22□□□□□ -1.89
LSM6P62312 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
LSM6P62312 MIR184-201ENST00000384962 84 ntBASIC3.22□□□□□ -1.89
LSM6P62312 MIR591-201ENST00000385290 95 ntBASIC3.22□□□□□ -1.89
LSM6P62312 RPL32P23-201ENST00000397237 405 ntBASIC3.22□□□□□ -1.89
LSM6P62312 AP000567.1-201ENST00000406413 156 ntBASIC3.22□□□□□ -1.89
LSM6P62312 RN7SKP156-201ENST00000410308 342 ntBASIC3.22□□□□□ -1.89
LSM6P62312 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LSM6P62312 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.22□□□□□ -1.89
LSM6P62312 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM6P62312 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM6P62312 MRPS18BP2-201ENST00000434310 759 ntBASIC3.22□□□□□ -1.89
LSM6P62312 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.22□□□□□ -1.89
LSM6P62312 RPL31P13-201ENST00000484151 370 ntBASIC3.22□□□□□ -1.89
LSM6P62312 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM6P62312 SEC11B-201ENST00000518383 499 ntBASIC3.22□□□□□ -1.89
LSM6P62312 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM6P62312 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM6P62312 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM6P62312 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.22□□□□□ -1.89
LSM6P62312 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM6P62312 AC008011.1-201ENST00000545989 227 ntBASIC3.22□□□□□ -1.89
LSM6P62312 AL121576.1-201ENST00000556055 276 ntBASIC3.22□□□□□ -1.89
LSM6P62312 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.22□□□□□ -1.89
LSM6P62312 HSPE1P5-201ENST00000561489 272 ntBASIC3.22□□□□□ -1.89
LSM6P62312 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.22□□□□□ -1.89
LSM6P62312 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM6P62312 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.22□□□□□ -1.89
LSM6P62312 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.22□□□□□ -1.89
LSM6P62312 RMST_8.1-201ENST00000610287 165 ntBASIC3.22□□□□□ -1.89
LSM6P62312 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LSM6P62312 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LSM6P62312 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LSM6P62312 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.21□□□□□ -1.89
LSM6P62312 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.21□□□□□ -1.89
LSM6P62312 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LSM6P62312 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
LSM6P62312 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LSM6P62312 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
LSM6P62312 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LSM6P62312 RNU6-283P-201ENST00000364788 107 ntBASIC3.21□□□□□ -1.9
LSM6P62312 EI24P2-201ENST00000397776 1076 ntBASIC3.21□□□□□ -1.9
LSM6P62312 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.21□□□□□ -1.9
LSM6P62312 RN7SKP285-201ENST00000410137 318 ntBASIC3.21□□□□□ -1.9
LSM6P62312 SNORA57.3-201ENST00000411095 141 ntBASIC3.21□□□□□ -1.9
LSM6P62312 RN7SKP263-201ENST00000411194 309 ntBASIC3.21□□□□□ -1.9
LSM6P62312 EI24P1-201ENST00000416584 867 ntBASIC3.21□□□□□ -1.9
LSM6P62312 OSTCP5-201ENST00000425293 453 ntBASIC3.21□□□□□ -1.9
LSM6P62312 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM6P62312 AC006994.1-201ENST00000438212 839 ntBASIC3.21□□□□□ -1.9
LSM6P62312 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM6P62312 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LSM6P62312 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.21□□□□□ -1.9
LSM6P62312 NPM1P49-201ENST00000448027 714 ntBASIC3.21□□□□□ -1.9
LSM6P62312 RPL29P29-201ENST00000448725 423 ntBASIC3.21□□□□□ -1.9
LSM6P62312 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM6P62312 AC010468.1-201ENST00000461022 817 ntBASIC3.21□□□□□ -1.9
LSM6P62312 GAPDHP36-201ENST00000480688 918 ntBASIC3.21□□□□□ -1.9
LSM6P62312 HMGB3P14-201ENST00000494195 599 ntBASIC3.21□□□□□ -1.9
LSM6P62312 AL035404.1-201ENST00000497982 568 ntBASIC3.21□□□□□ -1.9
LSM6P62312 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM6P62312 AC108120.2-201ENST00000512973 294 ntBASIC3.21□□□□□ -1.9
LSM6P62312 AC093853.1-201ENST00000515689 483 ntBASIC3.21□□□□□ -1.9
LSM6P62312 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM6P62312 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.21□□□□□ -1.9
LSM6P62312 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM6P62312 AC067959.1-201ENST00000604334 379 ntBASIC3.21□□□□□ -1.9
LSM6P62312 AC006946.3-201ENST00000609791 756 ntBASIC3.21□□□□□ -1.9
LSM6P62312 RNVU1-4-201ENST00000612985 164 ntBASIC3.21□□□□□ -1.9
LSM6P62312 AC245389.2-201ENST00000616023 576 ntBASIC3.21□□□□□ -1.9
LSM6P62312 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.21□□□□□ -1.9
LSM6P62312 AL590410.1-201ENST00000617925 333 ntBASIC3.21□□□□□ -1.9
LSM6P62312 AC243756.2-201ENST00000618406 463 ntBASIC3.21□□□□□ -1.9
LSM6P62312 AC242843.1-201ENST00000618702 573 ntBASIC3.21□□□□□ -1.9
LSM6P62312 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM6P62312 AC092184.1-201ENST00000625042 715 ntBASIC3.21□□□□□ -1.9
LSM6P62312 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM6P62312 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LSM6P62312 AC090337.1-201ENST00000579651 2074 ntBASIC3.21□□□□□ -1.9
LSM6P62312 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LSM6P62312 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LSM6P62312 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
LSM6P62312 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LSM6P62312 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LSM6P62312 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LSM6P62312 MIR607-201ENST00000385241 96 ntBASIC3.2□□□□□ -1.9
LSM6P62312 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LSM6P62312 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
LSM6P62312 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
LSM6P62312 RPS15AP6-201ENST00000420703 385 ntBASIC3.2□□□□□ -1.9
LSM6P62312 RPL7P2-201ENST00000427639 268 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms