Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.53□□□□□ -1.84
CXCL12P48061 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.53□□□□□ -1.84
CXCL12P48061 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.53□□□□□ -1.84
CXCL12P48061 COTL1P1-201ENST00000422309 375 ntBASIC3.53□□□□□ -1.84
CXCL12P48061 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.53□□□□□ -1.84
CXCL12P48061 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.53□□□□□ -1.84
CXCL12P48061 AC093084.1-201ENST00000424233 687 ntBASIC3.53□□□□□ -1.84
CXCL12P48061 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.53□□□□□ -1.84
CXCL12P48061 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.53□□□□□ -1.84
CXCL12P48061 BUD31P2-201ENST00000449374 300 ntBASIC3.53□□□□□ -1.84
CXCL12P48061 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.53□□□□□ -1.84
CXCL12P48061 AC037198.2-201ENST00000478845 733 ntBASIC3.53□□□□□ -1.84
CXCL12P48061 TMED11P-201ENST00000479478 690 ntBASIC3.53□□□□□ -1.84
CXCL12P48061 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.53□□□□□ -1.84
CXCL12P48061 EIF4BP1-201ENST00000554881 351 ntBASIC3.53□□□□□ -1.84
CXCL12P48061 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.53□□□□□ -1.84
CXCL12P48061 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CXCL12P48061 AC022387.2-201ENST00000604050 448 ntBASIC3.53□□□□□ -1.84
CXCL12P48061 AL356274.1-201ENST00000617064 410 ntBASIC3.53□□□□□ -1.84
CXCL12P48061 AL669942.2-201ENST00000620352 697 ntBASIC3.53□□□□□ -1.84
CXCL12P48061 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.53□□□□□ -1.84
CXCL12P48061 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CXCL12P48061 Z83843.1-201ENST00000604070 3685 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.52□□□□□ -1.85
CXCL12P48061 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL12P48061 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL12P48061 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL12P48061 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL12P48061 RNU6-152P-201ENST00000384037 107 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 MIR3074-201ENST00000384885 81 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.52□□□□□ -1.85
CXCL12P48061 MTHFD2P2-201ENST00000407725 247 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 MIR1289-1-201ENST00000408836 144 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 GSTM3P2-201ENST00000412746 530 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 MTND4LP13-201ENST00000425022 298 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 RNF19BPX-201ENST00000426224 625 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 RPS6P12-201ENST00000432491 726 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 RPL12P46-201ENST00000436610 195 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.52□□□□□ -1.85
CXCL12P48061 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.52□□□□□ -1.85
CXCL12P48061 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.52□□□□□ -1.85
CXCL12P48061 AC023598.1-201ENST00000472521 361 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 S100A11P1-201ENST00000477525 312 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.52□□□□□ -1.85
CXCL12P48061 AC069306.1-201ENST00000507006 843 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 Vault.1-201ENST00000516474 102 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 AC067904.2-201ENST00000517322 1283 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.52□□□□□ -1.85
CXCL12P48061 AC092868.3-201ENST00000560515 784 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.52□□□□□ -1.85
CXCL12P48061 MIR5004-201ENST00000579078 107 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 AC006504.3-201ENST00000586818 523 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.52□□□□□ -1.85
CXCL12P48061 AL451007.1-201ENST00000595491 289 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 AL133247.2-201ENST00000603236 482 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 HMGB1P51-201ENST00000605166 638 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 AC012603.1-201ENST00000606424 528 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 AC017076.1-201ENST00000607613 578 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.52□□□□□ -1.85
CXCL12P48061 AC015813.4-201ENST00000610469 179 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 AC004825.2-201ENST00000616634 455 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 AP006248.2-201ENST00000623309 592 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.52□□□□□ -1.85
CXCL12P48061 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CXCL12P48061 AC093311.1-201ENST00000506586 2021 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL12P48061 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CXCL12P48061 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL12P48061 AL049555.1-201ENST00000562834 1933 ntBASIC3.52□□□□□ -1.85
CXCL12P48061 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CXCL12P48061 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.51□□□□□ -1.85
CXCL12P48061 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CXCL12P48061 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.51□□□□□ -1.85
CXCL12P48061 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.51□□□□□ -1.85
CXCL12P48061 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CXCL12P48061 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
CXCL12P48061 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CXCL12P48061 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CXCL12P48061 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CXCL12P48061 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CXCL12P48061 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CXCL12P48061 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
CXCL12P48061 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CXCL12P48061 FRG1CP-201ENST00000358464 769 ntBASIC3.51□□□□□ -1.85
CXCL12P48061 RN7SKP111-201ENST00000410349 271 ntBASIC3.51□□□□□ -1.85
CXCL12P48061 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.51□□□□□ -1.85
CXCL12P48061 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.51□□□□□ -1.85
CXCL12P48061 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CXCL12P48061 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.51□□□□□ -1.85
CXCL12P48061 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.51□□□□□ -1.85
CXCL12P48061 RSL24D1P2-201ENST00000445584 366 ntBASIC3.51□□□□□ -1.85
CXCL12P48061 IFNWP4-201ENST00000453148 294 ntBASIC3.51□□□□□ -1.85
CXCL12P48061 RPL27AP5-201ENST00000469428 449 ntBASIC3.51□□□□□ -1.85
CXCL12P48061 AC020893.1-201ENST00000502452 580 ntBASIC3.51□□□□□ -1.85
CXCL12P48061 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.51□□□□□ -1.85
CXCL12P48061 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.51□□□□□ -1.85
CXCL12P48061 AC110794.1-201ENST00000505816 425 ntBASIC3.51□□□□□ -1.85
CXCL12P48061 FCF1P8-201ENST00000510322 597 ntBASIC3.51□□□□□ -1.85
CXCL12P48061 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.51□□□□□ -1.85
CXCL12P48061 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms